Difference between revisions of "ORNITHINE-GLU-AMINOTRANSFERASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ORNITHINE-GLU-AMINOTRANSFERASE-RXN ORNITHINE-GLU-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBL...") |
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* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/2.6.1.13 EC-2.6.1.13] | ||
* common name: | * common name: | ||
** Ornithine--oxo-glutarate aminotransferase | ** Ornithine--oxo-glutarate aminotransferase | ||
** ornithine-δ-aminotransferase | ** ornithine-δ-aminotransferase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
| Line 21: | Line 21: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
| − | |||
| − | |||
* [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] | * [[PWY-6344]], L-ornithine degradation II (Stickland reaction): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6344 PWY-6344] | ||
| − | ** ''' | + | ** '''2''' reactions found over '''9''' reactions in the full pathway |
| − | + | ||
| − | + | ||
| − | + | ||
| − | + | ||
* [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981] | * [[PWY-4981]], L-proline biosynthesis II (from arginine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4981 PWY-4981] | ||
| − | ** ''' | + | ** '''3''' reactions found over '''6''' reactions in the full pathway |
* [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY] | * [[ARGININE-SYN4-PWY]], L-ornithine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=ARGININE-SYN4-PWY ARGININE-SYN4-PWY] | ||
** '''3''' reactions found over '''4''' reactions in the full pathway | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-6922]], L-Nδ-acetylornithine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6922 PWY-6922] | ||
| + | ** '''5''' reactions found over '''7''' reactions in the full pathway | ||
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY] | * [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY] | ||
| − | ** ''' | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
| + | * [[ARGASEDEG-PWY]], L-arginine degradation I (arginase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGASEDEG-PWY ARGASEDEG-PWY] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[ARG-PRO-PWY]], L-arginine degradation VI (arginase 2 pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARG-PRO-PWY ARG-PRO-PWY] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-3341]], L-proline biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3341 PWY-3341] | ||
| + | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 55: | Line 55: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00667 R00667] | ** [http://www.genome.jp/dbget-bin/www_bget?R00667 R00667] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: ec number=EC-2.6.1.13}} | ||
{{#set: common name=Ornithine--oxo-glutarate aminotransferase}} | {{#set: common name=Ornithine--oxo-glutarate aminotransferase}} | ||
{{#set: common name=ornithine-δ-aminotransferase}} | {{#set: common name=ornithine-δ-aminotransferase}} | ||
| − | |||
{{#set: gene associated=SJ09475}} | {{#set: gene associated=SJ09475}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY-6344|PWY-4981|ARGININE-SYN4-PWY|PWY-6922|CITRULBIO-PWY|ARGASEDEG-PWY|ARG-PRO-PWY|PWY-3341}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:16, 10 January 2019
Contents
Reaction ORNITHINE-GLU-AMINOTRANSFERASE-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- Ornithine--oxo-glutarate aminotransferase
- ornithine-δ-aminotransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-ORNITHINE[c] + 1 2-KETOGLUTARATE[c] <=> 1 GLT[c] + 1 L-GLUTAMATE_GAMMA-SEMIALDEHYDE[c]
- With common name(s):
- 1 L-ornithine[c] + 1 2-oxoglutarate[c] <=> 1 L-glutamate[c] + 1 L-glutamate-5-semialdehyde[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ09475
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6344, L-ornithine degradation II (Stickland reaction): PWY-6344
- 2 reactions found over 9 reactions in the full pathway
- PWY-4981, L-proline biosynthesis II (from arginine): PWY-4981
- 3 reactions found over 6 reactions in the full pathway
- ARGININE-SYN4-PWY, L-ornithine biosynthesis II: ARGININE-SYN4-PWY
- 3 reactions found over 4 reactions in the full pathway
- PWY-6922, L-Nδ-acetylornithine biosynthesis: PWY-6922
- 5 reactions found over 7 reactions in the full pathway
- CITRULBIO-PWY, L-citrulline biosynthesis: CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- ARGASEDEG-PWY, L-arginine degradation I (arginase pathway): ARGASEDEG-PWY
- 3 reactions found over 3 reactions in the full pathway
- ARG-PRO-PWY, L-arginine degradation VI (arginase 2 pathway): ARG-PRO-PWY
- 3 reactions found over 4 reactions in the full pathway
- PWY-3341, L-proline biosynthesis III: PWY-3341
- 4 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
