Difference between revisions of "3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN] == * direction: ** L...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-hydroxyisobutyrate dehydrogenase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.1.1.31 EC-1.1.1.31]
 
** [http://enzyme.expasy.org/EC/1.1.1.31 EC-1.1.1.31]
 +
* common name:
 +
** 3-hydroxyisobutyrate dehydrogenase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[CPD-12175]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c]
+
** 1 [[CPD-12175]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[CH3-MALONATE-S-ALD]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 (S)-3-hydroxy-isobutanoate[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c]
+
** 1 (S)-3-hydroxy-isobutanoate[c] '''+''' 1 NAD+[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 (S)-methylmalonate-semialdehyde[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ21390]]
 
−
** Source: [[orthology-nannochloropsis_salina]]
 
−
* Gene: [[SJ03584]]
 
−
** Source: [[orthology-nannochloropsis_salina]]
 
 
* Gene: [[SJ07211]]
 
* Gene: [[SJ07211]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ16180]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
 
* Gene: [[SJ14331]]
 
* Gene: [[SJ14331]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ16180]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ03584]]
 +
** Source: [[orthology-nannochloropsis_salina]]
 +
* Gene: [[SJ21390]]
 +
** Source: [[orthology-nannochloropsis_salina]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
 
* [[VALDEG-PWY]], L-valine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=VALDEG-PWY VALDEG-PWY]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''8''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
*** Tool: [[pantograph]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 46: Line 46:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=17682 17682]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02047 R02047]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02047 R02047]
Line 55: Line 57:
 
** [http://www.uniprot.org/uniprot/Q9XTI0 Q9XTI0]
 
** [http://www.uniprot.org/uniprot/Q9XTI0 Q9XTI0]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-hydroxyisobutyrate dehydrogenase}}
 
 
{{#set: ec number=EC-1.1.1.31}}
 
{{#set: ec number=EC-1.1.1.31}}
−
{{#set: gene associated=SJ21390|SJ03584|SJ07211|SJ16180|SJ14331}}
+
{{#set: common name=3-hydroxyisobutyrate dehydrogenase}}
 +
{{#set: gene associated=SJ07211|SJ14331|SJ16180|SJ03584|SJ21390}}
 
{{#set: in pathway=VALDEG-PWY}}
 
{{#set: in pathway=VALDEG-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 16:21, 10 January 2019

Reaction 3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 3-hydroxyisobutyrate dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 (S)-3-hydroxy-isobutanoate[c] + 1 NAD+[c] => 1 H+[c] + 1 NADH[c] + 1 (S)-methylmalonate-semialdehyde[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • VALDEG-PWY, L-valine degradation I: VALDEG-PWY
    • 6 reactions found over 8 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=3-HYDROXYISOBUTYRATE-DEHYDROGENASE-RXN&oldid=22667"