Difference between revisions of "SJ07646"

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(Created page with "Category:Gene == Gene SJ07646 == * right end position: ** 54789 * transcription direction: ** POSITIVE * left end position: ** 37504 * centisome position: ** 58.595425...")
 
 
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[[Category:Gene]]
 
[[Category:Gene]]
 
== Gene SJ07646 ==
 
== Gene SJ07646 ==
−
* right end position:
 
−
** 54789
 
 
* transcription direction:
 
* transcription direction:
 
** POSITIVE
 
** POSITIVE
 +
* right end position:
 +
** 54789
 
* left end position:
 
* left end position:
 
** 37504
 
** 37504
Line 19: Line 19:
 
*** Assignment: go-term
 
*** Assignment: go-term
 
* Reaction: [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
 
* Reaction: [[3-SULFINOALANINE-AMINOTRANSFERASE-RXN]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Reaction: [[ASPAMINOTRANS-RXN]]
 
* Reaction: [[ASPAMINOTRANS-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Reaction: [[CYSTEINE-AMINOTRANSFERASE-RXN]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Reaction: [[CYSTEINE-AMINOTRANSFERASE-RXN]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[HISTAMINOTRANS-RXN]]
 
* Reaction: [[HISTAMINOTRANS-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 41: Line 41:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-10721]]
 
* Reaction: [[RXN-10721]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 56: Line 56:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-13697]]
 
* Reaction: [[RXN-13697]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 73: Line 73:
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
== Pathways associated ==
 
== Pathways associated ==
−
* [[TYRFUMCAT-PWY]]
+
* [[PWY-7117]]
−
* [[PWY-7383]]
+
* [[GLUTDEG-PWY]]
 
* [[ASPARTATESYN-PWY]]
 
* [[ASPARTATESYN-PWY]]
−
* [[HISTSYN-PWY]]
+
* [[PWY-6643]]
−
* [[PWY-7115]]
+
* [[PWY3O-4108]]
 +
* [[PWY-7383]]
 
* [[PWY-5329]]
 
* [[PWY-5329]]
 +
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
 +
* [[PWY-6638]]
 +
* [[PWY-3581]]
 
* [[PWY-5754]]
 
* [[PWY-5754]]
−
* [[PWY-5048]]
 
−
* [[PWY-5913]]
 
 
* [[CYSTEINE-DEG-PWY]]
 
* [[CYSTEINE-DEG-PWY]]
−
* [[PWY-6643]]
+
* [[PWY-7115]]
−
* [[PWY-6642]]
+
* [[PWY0-1534]]
−
* [[PWY-7432]]
+
* [[PWY-6318]]
−
* [[PWY-7518]]
+
* [[ASPARAGINE-DEG1-PWY-1]]
 
* [[ANAPHENOXI-PWY]]
 
* [[ANAPHENOXI-PWY]]
−
* [[MALATE-ASPARTATE-SHUTTLE-PWY]]
+
* [[PHESYN]]
 +
* [[PWY-5151]]
 +
* [[PWY-5048]]
 
* [[TYRSYN]]
 
* [[TYRSYN]]
−
* [[PWY-3581]]
 
−
* [[PWY-7117]]
 
 
* [[ASPARTATE-DEG1-PWY]]
 
* [[ASPARTATE-DEG1-PWY]]
−
* [[PWY0-1534]]
+
* [[PWY-5913]]
 +
* [[PWY-6642]]
 
* [[PWY-5886]]
 
* [[PWY-5886]]
−
* [[GLUTDEG-PWY]]
+
* [[PWY-7432]]
−
* [[PWY-6318]]
+
* [[PWY-6309]]
 
* [[PWY-5079]]
 
* [[PWY-5079]]
 
* [[PWY-7514]]
 
* [[PWY-7514]]
−
* [[PWY3O-4108]]
+
* [[TYRFUMCAT-PWY]]
−
* [[PHESYN]]
+
* [[HISTSYN-PWY]]
−
* [[PWY-5151]]
+
* [[PWY-7518]]
−
* [[PWY-6638]]
+
−
* [[ASPARAGINE-DEG1-PWY-1]]
+
−
* [[PWY-6309]]
+
 
== External links  ==
 
== External links  ==
 +
{{#set: transcription direction=POSITIVE}}
 
{{#set: right end position=54789}}
 
{{#set: right end position=54789}}
−
{{#set: transcription direction=POSITIVE}}
 
 
{{#set: left end position=37504}}
 
{{#set: left end position=37504}}
 
{{#set: centisome position=58.595425    }}
 
{{#set: centisome position=58.595425    }}
 
{{#set: reaction associated=2.6.1.57-RXN|2.6.1.7-RXN|3-SULFINOALANINE-AMINOTRANSFERASE-RXN|ASPAMINOTRANS-RXN|CYSTEINE-AMINOTRANSFERASE-RXN|HISTAMINOTRANS-RXN|PHEAMINOTRANS-RXN|RXN-10721|RXN-10814|RXN-11737|RXN-13697|RXN-14147|TYROSINE-AMINOTRANSFERASE-RXN}}
 
{{#set: reaction associated=2.6.1.57-RXN|2.6.1.7-RXN|3-SULFINOALANINE-AMINOTRANSFERASE-RXN|ASPAMINOTRANS-RXN|CYSTEINE-AMINOTRANSFERASE-RXN|HISTAMINOTRANS-RXN|PHEAMINOTRANS-RXN|RXN-10721|RXN-10814|RXN-11737|RXN-13697|RXN-14147|TYROSINE-AMINOTRANSFERASE-RXN}}
−
{{#set: pathway associated=TYRFUMCAT-PWY|PWY-7383|ASPARTATESYN-PWY|HISTSYN-PWY|PWY-7115|PWY-5329|PWY-5754|PWY-5048|PWY-5913|CYSTEINE-DEG-PWY|PWY-6643|PWY-6642|PWY-7432|PWY-7518|ANAPHENOXI-PWY|MALATE-ASPARTATE-SHUTTLE-PWY|TYRSYN|PWY-3581|PWY-7117|ASPARTATE-DEG1-PWY|PWY0-1534|PWY-5886|GLUTDEG-PWY|PWY-6318|PWY-5079|PWY-7514|PWY3O-4108|PHESYN|PWY-5151|PWY-6638|ASPARAGINE-DEG1-PWY-1|PWY-6309}}
+
{{#set: pathway associated=PWY-7117|GLUTDEG-PWY|ASPARTATESYN-PWY|PWY-6643|PWY3O-4108|PWY-7383|PWY-5329|MALATE-ASPARTATE-SHUTTLE-PWY|PWY-6638|PWY-3581|PWY-5754|CYSTEINE-DEG-PWY|PWY-7115|PWY0-1534|PWY-6318|ASPARAGINE-DEG1-PWY-1|ANAPHENOXI-PWY|PHESYN|PWY-5151|PWY-5048|TYRSYN|ASPARTATE-DEG1-PWY|PWY-5913|PWY-6642|PWY-5886|PWY-7432|PWY-6309|PWY-5079|PWY-7514|TYRFUMCAT-PWY|HISTSYN-PWY|PWY-7518}}

Latest revision as of 16:21, 10 January 2019

Gene SJ07646

  • transcription direction:
    • POSITIVE
  • right end position:
    • 54789
  • left end position:
    • 37504
  • centisome position:
    • 58.595425
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=SJ07646&oldid=22685"