Difference between revisions of "DNA-DIRECTED-RNA-POLYMERASE-RXN"

Revision as of 12:46, 18 May 2018

Reaction DNA-DIRECTED-RNA-POLYMERASE-RXN

• direction:
  • REVERSIBLE
• common name:
  • DNA-directed 5'-3' RNA polymerase
  • RNA polymerase
• ec number:
  • EC-2.7.7.6
• Synonym(s):

Reaction Formula

• With identifiers:
  • 1 Nucleoside-Triphosphates[c] + 1 RNA-Holder[c] <=> 1 RNA-Holder[c] + 1 PPI[c]
• With common name(s):
  • 1 a nucleoside triphosphate[c] + 1 RNA[c] <=> 1 RNA[c] + 1 diphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

• Gene: SJ00495
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ05246
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ17132
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ00841
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ21402
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ03336
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ20135
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ21840
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ14115
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ11123
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ21618
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05272
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ01693
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ21807
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ22476
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ06292
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ00209
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ19064
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ03147
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ11974
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ20134
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
• Gene: SJ22543
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ20622
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ17122
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ02176
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ05538
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ01888
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ06758
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
• Gene: SJ12070
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ20648
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ16014
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ17061
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ00803
  • Source: annotation-saccharina_japonica_genome
    • Assignment: GO-TERM
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ06735
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER
  • Source: orthology-ectocarpus_siliculosus
• Gene: SJ06734
  • Source: annotation-saccharina_japonica_genome
    • Assignment: EC-NUMBER

Pathways

Reconstruction information

• Category: orthology
  • Source: orthology-ectocarpus_siliculosus
    • Tool: pantograph
• Category: annotation
  • Source: annotation-saccharina_japonica_genome
    • Tool: pathwaytools

External links

• UNIPROT:
  • P08518
  • P07703
  • P11414
  • P08266
  • P08775
  • P11704
  • Q26794
  • Q26791
  • P17546
  • P20433
  • P19388
  • P14563
  • Q9HM79
  • P16356
  • Q26793
  • P20434
  • P19387
  • P28000
  • P22138
  • P0A7Z7
  • P22703
  • P38421
  • P32910
  • P32529
  • P0A4E5
  • P61217
  • P35084
  • Q57648
  • Q46449
  • Q9V115
  • Q9PM80
  • Q46124
  • P11705
  • P17545
  • P14564
  • P11512
  • P22704
  • P43737
  • Q58446
  • O96236
  • Q9PI30
  • P06505
  • P11703
  • P20436
  • P22705
  • Q57832
  • O51349
  • Q9PN25
  • Q9JX03
  • P33058
  • P47268
  • Q57839
  • O27123
  • P57009
  • P20429
  • Q57840
  • Q58785
  • P33054
  • P33812
  • P29398
  • P47423
  • P47582
  • Q57650
  • Q58443
  • O27124
  • P37870
  • P66724
  • P43739
  • P43740
  • P47583
  • Q58444
  • O27125
  • O67763
  • O84316
  • Q9HWC9
  • P33053
  • P43738
  • Q60181
  • O27126
  • O84317
  • Q9UYX7
  • P66704
  • Q42483
  • Q39477
  • P18616
  • Q9R5E7
  • P19175
  • P19176
  • P20028
  • P15398
  • P12464
  • Q06356
  • Q06357
  • Q06358
  • Q25655
  • P00573
  • P18147
  • P07659
  • P27999
  • P04050
  • P17890
  • P04051
  • P20435
  • P06173
  • P0A7Z4
  • P0A8V2
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  • P0A800
  • P23579
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  • P04052
  • P25167
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  • P06272
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  • P12090
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  • P12093
  • P68611
  • P68610
  • P68609
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  • P21603
  • P24757
  • P07392
  • Q76ZP7
  • P68694
  • P21087
  • P16716
  • P17474
  • P12073
  • P09562
  • P16023
  • P16024
  • P16025
  • P14248
  • P21421
  • P08036
  • P08968
  • P09844
  • P09845
  • P09846
  • P09847
  • P15352
  • P15351
  • P15349
  • P15353
  • P15354
  • Q23692
  • P13911
  • P11513
  • P11514
  • P12227
  • P06221
  • P21422
  • Q99366
  • Q99367
  • Q99368
  • P31815
  • P42075
  • P42076
  • P42078
  • P24928
  • P27059
  • P41559
  • P31814
  • P31813
  • P29158
  • Q03588
  • Q03587
  • Q03585
  • Q03586
  • P36594
  • Q8HTL6
  • Q8HTL7
  • Q01569
  • P33540
  • P33539
  • P30876
  • P34087
  • Q01923
  • P30760
  • P30761
  • Q83656
  • P41184
  • P41185
  • P28363
  • P28364
  • Q02061
  • P35718
  • P61218
  • P39466
  • P36958
  • Q33533
  • P36252
  • P36954
  • P36440
  • P36441
  • P39471
  • P39472
  • P41558
  • P41557
  • P41556
  • P14247
  • P39463
  • P46818
  • P22139
  • P16370
  • P50546
  • P13433
  • P50106
  • P32349
  • P40422
  • P38902
  • P47768
  • P47770
  • O03685
  • Q50295
  • Q01080
  • Q42877
  • Q40293
  • Q25543
  • Q40295
  • Q11199
  • Q41524
  • P22276
  • P10964
  • P25441
  • P28365
  • Q27826
  • Q39211
  • Q39212
  • Q31854
  • Q38859
  • P52435
  • Q25802
  • Q27900
  • P51250
  • P51251
  • P51252
  • P95989
  • P74177
  • P73297
  • P73334
  • P77965
  • Q48975
  • Q48981
  • Q49003
  • Q49077
  • P46217
  • P42486
  • P42487
  • O21237
  • O21238
  • O21260
  • P49465
  • P49466
  • P49467
  • P49468
  • O82725
  • O55766
  • Q43553
  • O24216
  • P38420
  • O23999
  • P48120
  • P42080
  • P48119
  • P48118
  • P56299
  • P56300
  • P12465
  • P56298
  • P41606
  • P52733
  • P41607
  • P41629
  • Q39290
  • P91875
  • O35134
  • O54889
  • P38671
  • Q9YW50
  • O21375
  • Q85373
  • P33811
  • O74633
  • Q85288
  • Q98246
  • Q98264
  • Q98839
  • Q98301
  • O57187
  • O96446
  • O96452
  • O77165
  • O13896
  • O14086
  • P87123
  • O14459
  • O94616
  • P36595
  • O54888
  • P70700
  • O09451
  • P47767
  • O74635
  • Q09177
  • Q92399
  • O13877
  • P48011
  • Q10578
  • O48909
  • O48910
  • O48911
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  • O48914
  • O50634
  • O81098
  • O81097
  • P19749