Difference between revisions of "XANTHINE-OXIDASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XANTHINE-OXIDASE-RXN XANTHINE-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** xanth...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** xanthine oxidase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.17.3.2 EC-1.17.3.2]
 
** [http://enzyme.expasy.org/EC/1.17.3.2 EC-1.17.3.2]
 +
* common name:
 +
** xanthine oxidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[XANTHINE]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''=>''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[URATE]][c]
+
** 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[XANTHINE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[URATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 xanthine[c] '''+''' 1 H2O[c] '''+''' 1 oxygen[c] '''=>''' 1 hydrogen peroxide[c] '''+''' 1 urate[c]
+
** 1 oxygen[c] '''+''' 1 xanthine[c] '''+''' 1 H2O[c] '''=>''' 1 urate[c] '''+''' 1 hydrogen peroxide[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ05674]]
+
* Gene: [[SJ05673]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ13101]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
* Gene: [[SJ05660]]
 
* Gene: [[SJ05660]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 30: Line 31:
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ05673]]
+
* Gene: [[SJ13095]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ13101]]
+
* Gene: [[SJ05674]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[SJ13098]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ13100]]
 
* Gene: [[SJ13100]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ13095]]
+
* Gene: [[SJ13098]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-arabidopsis_thaliana]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
 
−
** '''2''' reactions found over '''9''' reactions in the full pathway
 
 
* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
 
* [[PWY-6538]], caffeine degradation III (bacteria, via demethylation): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6538 PWY-6538]
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6999]], theophylline degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6999 PWY-6999]
 +
** '''2''' reactions found over '''9''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 62: Line 62:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21132 21132]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21133 21133]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02107 R02107]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02107 R02107]
Line 70: Line 70:
 
** [http://www.uniprot.org/uniprot/Q62637 Q62637]
 
** [http://www.uniprot.org/uniprot/Q62637 Q62637]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=xanthine oxidase}}
 
 
{{#set: ec number=EC-1.17.3.2}}
 
{{#set: ec number=EC-1.17.3.2}}
−
{{#set: gene associated=SJ05674|SJ05660|SJ05668|SJ05673|SJ13101|SJ13098|SJ13100|SJ13095}}
+
{{#set: common name=xanthine oxidase}}
−
{{#set: in pathway=PWY-6999|PWY-6538}}
+
{{#set: gene associated=SJ05673|SJ13101|SJ05660|SJ05668|SJ13095|SJ05674|SJ13100|SJ13098}}
 +
{{#set: in pathway=PWY-6538|PWY-6999}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:51, 10 January 2019

Reaction XANTHINE-OXIDASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • xanthine oxidase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6538, caffeine degradation III (bacteria, via demethylation): PWY-6538
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6999, theophylline degradation: PWY-6999
    • 2 reactions found over 9 reactions in the full pathway

Reconstruction information

External links





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