Difference between revisions of "RXN0-2301"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-2301 RXN0-2301] == * direction: ** LEFT-TO-RIGHT * common name: ** isovaleryl-CoA dehydrogenas...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4] | ** [http://enzyme.expasy.org/EC/1.3.8.4 EC-1.3.8.4] | ||
| + | * common name: | ||
| + | ** isovaleryl-CoA dehydrogenase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[ISOVALERYL-COA]][c] '''+''' 1 [[ETF-Oxidized]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[3-METHYL-CROTONYL-COA]][c] '''+''' 1 [[ETF-Reduced]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 isovaleryl-CoA[c] '''+''' 1 an oxidized electron-transfer flavoprotein[c] '''+''' 1 H+[c] '''=>''' 1 3-methylcrotonyl-CoA[c] '''+''' 1 a reduced electron-transfer flavoprotein[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 23: | Line 23: | ||
== Pathways == | == Pathways == | ||
* [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY] | * [[LEU-DEG2-PWY]], L-leucine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=LEU-DEG2-PWY LEU-DEG2-PWY] | ||
| − | ** ''' | + | ** '''4''' reactions found over '''6''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 33: | Line 33: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12277 12277] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04096 R04096] | ** [http://www.genome.jp/dbget-bin/www_bget?R04096 R04096] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.3.8.4}} | {{#set: ec number=EC-1.3.8.4}} | ||
| + | {{#set: common name=isovaleryl-CoA dehydrogenase}} | ||
{{#set: gene associated=SJ07241}} | {{#set: gene associated=SJ07241}} | ||
{{#set: in pathway=LEU-DEG2-PWY}} | {{#set: in pathway=LEU-DEG2-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:26, 10 January 2019
Contents
Reaction RXN0-2301
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- isovaleryl-CoA dehydrogenase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ISOVALERYL-COA[c] + 1 ETF-Oxidized[c] + 1 PROTON[c] => 1 3-METHYL-CROTONYL-COA[c] + 1 ETF-Reduced[c]
- With common name(s):
- 1 isovaleryl-CoA[c] + 1 an oxidized electron-transfer flavoprotein[c] + 1 H+[c] => 1 3-methylcrotonyl-CoA[c] + 1 a reduced electron-transfer flavoprotein[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ07241
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- LEU-DEG2-PWY, L-leucine degradation I: LEU-DEG2-PWY
- 4 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
