Difference between revisions of "DAHPSYN-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=DAHPSYN-RXN DAHPSYN-RXN] == * direction: ** REVERSIBLE * common name: ** 2-dehydro-3-deoxyphosphohe...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.5.1.54 EC-2.5.1.54] | ** [http://enzyme.expasy.org/EC/2.5.1.54 EC-2.5.1.54] | ||
| + | * common name: | ||
| + | ** 2-dehydro-3-deoxyphosphoheptonate aldolase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PHOSPHO-ENOL-PYRUVATE]][c] '''+''' 1 [[ERYTHROSE-4P]][c] '''+''' 1 [[WATER]][c] '''<=>''' 1 [[3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P]][c] '''+''' 1 [[Pi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 phosphoenolpyruvate[c] '''+''' 1 D-erythrose 4-phosphate[c] '''+''' 1 H2O[c] '''<=>''' 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] '''+''' 1 phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 20: | Line 20: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164] | * [[PWY-6164]], 3-dehydroquinate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6164 PWY-6164] | ||
| Line 29: | Line 29: | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 39: | Line 39: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14720 14720] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01826 R01826] | ** [http://www.genome.jp/dbget-bin/www_bget?R01826 R01826] | ||
| Line 66: | Line 66: | ||
** [http://www.uniprot.org/uniprot/O52798 O52798] | ** [http://www.uniprot.org/uniprot/O52798 O52798] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-2.5.1.54}} | {{#set: ec number=EC-2.5.1.54}} | ||
| + | {{#set: common name=2-dehydro-3-deoxyphosphoheptonate aldolase}} | ||
{{#set: gene associated=SJ04251}} | {{#set: gene associated=SJ04251}} | ||
{{#set: in pathway=PWY-6164}} | {{#set: in pathway=PWY-6164}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana| | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:37, 10 January 2019
Contents
Reaction DAHPSYN-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- 2-dehydro-3-deoxyphosphoheptonate aldolase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PHOSPHO-ENOL-PYRUVATE[c] + 1 ERYTHROSE-4P[c] + 1 WATER[c] <=> 1 3-DEOXY-D-ARABINO-HEPTULOSONATE-7-P[c] + 1 Pi[c]
- With common name(s):
- 1 phosphoenolpyruvate[c] + 1 D-erythrose 4-phosphate[c] + 1 H2O[c] <=> 1 3-deoxy-D-arabino-heptulosonate 7-phosphate[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ04251
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6164, 3-dehydroquinate biosynthesis I: PWY-6164
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
