Difference between revisions of "UDP-GLUCURONATE-4-EPIMERASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=UDP-GLUCURONATE-4-EPIMERASE-RXN UDP-GLUCURONATE-4-EPIMERASE-RXN] == * direction: ** REVERSIBLE * co...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/5.1.3.6 EC-5.1.3.6] | ** [http://enzyme.expasy.org/EC/5.1.3.6 EC-5.1.3.6] | ||
| + | * common name: | ||
| + | ** UDP-glucuronate 4-epimerase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 21: | Line 21: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ04385]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ19982]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ01092]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY-6415]], L-ascorbate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415] | * [[PWY-6415]], L-ascorbate biosynthesis V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6415 PWY-6415] | ||
** '''4''' reactions found over '''11''' reactions in the full pathway | ** '''4''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[PWY-4861]], UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate): [http://metacyc.org/META/NEW-IMAGE?object=PWY-4861 PWY-4861] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 51: | Line 51: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01385 R01385] | ** [http://www.genome.jp/dbget-bin/www_bget?R01385 R01385] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
{{#set: ec number=EC-5.1.3.6}} | {{#set: ec number=EC-5.1.3.6}} | ||
| − | {{#set: gene associated=SJ10400 | + | {{#set: common name=UDP-glucuronate 4-epimerase}} |
| − | {{#set: in pathway=PWY- | + | {{#set: gene associated=SJ10400|SJ04385|SJ19982|SJ01092}} |
| + | {{#set: in pathway=PWY-6415|PWY-4861}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:38, 10 January 2019
Contents
Reaction UDP-GLUCURONATE-4-EPIMERASE-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- UDP-glucuronate 4-epimerase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 UDP-GLUCURONATE[c] <=> 1 UDP-D-GALACTURONATE[c]
- With common name(s):
- 1 UDP-α-D-glucuronate[c] <=> 1 UDP-α-D-galacturonate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10400
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ04385
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19982
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ01092
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6415, L-ascorbate biosynthesis V: PWY-6415
- 4 reactions found over 11 reactions in the full pathway
- PWY-4861, UDP-α-D-galacturonate biosynthesis I (from UDP-D-glucuronate): PWY-4861
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
