Difference between revisions of "GTP-CYCLOHYDRO-I-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GTP-CYCLOHYDRO-I-RXN GTP-CYCLOHYDRO-I-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** GTP c...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** GTP cyclohydrolase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.5.4.16 EC-3.5.4.16]
 
** [http://enzyme.expasy.org/EC/3.5.4.16 EC-3.5.4.16]
 +
* common name:
 +
** GTP cyclohydrolase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[GTP]][c] '''=>''' 1 [[DIHYDRONEOPTERIN-P3]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c]
+
** 1 [[GTP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[DIHYDRONEOPTERIN-P3]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 GTP[c] '''=>''' 1 7,8-dihydroneopterin 3'-triphosphate[c] '''+''' 1 H+[c] '''+''' 1 formate[c]
+
** 1 GTP[c] '''+''' 1 H2O[c] '''=>''' 1 H+[c] '''+''' 1 formate[c] '''+''' 1 7,8-dihydroneopterin 3'-triphosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
Line 20: Line 20:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5663]], tetrahydrobiopterin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5663 PWY-5663]
+
* [[PWY-7852]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7852 PWY-7852]
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
+
* [[PWY-5664]], erythro-tetrahydrobiopterin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5664 PWY-5664]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1433]], tetrahydromonapterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1433 PWY0-1433]
 
* [[PWY0-1433]], tetrahydromonapterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1433 PWY0-1433]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-5663]], erythro-tetrahydrobiopterin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5663 PWY-5663]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7442 PWY-7442]
 
* [[PWY-7442]], drosopterin and aurodrosopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7442 PWY-7442]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5664]], tetrahydrobiopterin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5664 PWY-5664]
+
* [[PWY-6983]], threo-tetrahydrobiopterin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6983 PWY-6983]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-6147]], 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6147 PWY-6147]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY-6703]], preQ0 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703]
 
* [[PWY-6703]], preQ0 biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6703 PWY-6703]
 
** '''1''' reactions found over '''4''' reactions in the full pathway
 
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-6983]], tetrahydrobiopterin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6983 PWY-6983]
 
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
*** Tool: [[pantograph]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 +
*** Tool: [[pantograph]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
*** Tool: [[pantograph]]
 
*** Tool: [[pantograph]]
 
* Category: [[annotation]]
 
* Category: [[annotation]]
Line 70: Line 72:
 
** [http://www.uniprot.org/uniprot/Q55759 Q55759]
 
** [http://www.uniprot.org/uniprot/Q55759 Q55759]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=GTP cyclohydrolase}}
 
 
{{#set: ec number=EC-3.5.4.16}}
 
{{#set: ec number=EC-3.5.4.16}}
 +
{{#set: common name=GTP cyclohydrolase}}
 
{{#set: gene associated=SJ00877}}
 
{{#set: gene associated=SJ00877}}
−
{{#set: in pathway=PWY-5663|PWY-6147|PWY0-1433|PWY-7442|PWY-5664|PWY-6703|PWY-6983}}
+
{{#set: in pathway=PWY-7852|PWY-5664|PWY0-1433|PWY-5663|PWY-7442|PWY-6983|PWY-6147|PWY-6703}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 11:13, 10 January 2019

Reaction GTP-CYCLOHYDRO-I-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • GTP cyclohydrolase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 GTP[c] + 1 H2O[c] => 1 H+[c] + 1 formate[c] + 1 7,8-dihydroneopterin 3'-triphosphate[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7852, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis IV (Plasmodium): PWY-7852
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5664, erythro-tetrahydrobiopterin biosynthesis II: PWY-5664
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-1433, tetrahydromonapterin biosynthesis: PWY0-1433
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5663, erythro-tetrahydrobiopterin biosynthesis I: PWY-5663
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-7442, drosopterin and aurodrosopterin biosynthesis: PWY-7442
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6983, threo-tetrahydrobiopterin biosynthesis: PWY-6983
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-6147, 6-hydroxymethyl-dihydropterin diphosphate biosynthesis I: PWY-6147
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-6703, preQ0 biosynthesis: PWY-6703
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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