Difference between revisions of "PRPPAMIDOTRANS-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PRPPAMIDOTRANS-RXN PRPPAMIDOTRANS-RXN] == * direction: ** REVERSIBLE * common name: ** amidophospho...") |
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* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| − | |||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.4.2.14 EC-2.4.2.14] | ** [http://enzyme.expasy.org/EC/2.4.2.14 EC-2.4.2.14] | ||
| + | * common name: | ||
| + | ** amidophosphoribosyltransferase | ||
| + | ** amidophosphoribosyl transferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[ | + | ** 1 [[5-P-BETA-D-RIBOSYL-AMINE]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[GLT]][c] '''<=>''' 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[PRPP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 5-phospho-β-D-ribosylamine[c] '''+''' 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 | + | ** 1 5-phospho-β-D-ribosylamine[c] '''+''' 1 diphosphate[c] '''+''' 1 L-glutamate[c] '''<=>''' 1 L-glutamine[c] '''+''' 1 H2O[c] '''+''' 1 5-phospho-α-D-ribose 1-diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ04979]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ15928]] | * Gene: [[SJ15928]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 24: | Line 29: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
== Pathways == | == Pathways == | ||
| + | * [[PWY-6277]], superpathway of 5-aminoimidazole ribonucleotide biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6277 PWY-6277] | ||
| + | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
* [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121] | * [[PWY-6121]], 5-aminoimidazole ribonucleotide biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6121 PWY-6121] | ||
** '''5''' reactions found over '''5''' reactions in the full pathway | ** '''5''' reactions found over '''5''' reactions in the full pathway | ||
| Line 37: | Line 39: | ||
** '''4''' reactions found over '''5''' reactions in the full pathway | ** '''4''' reactions found over '''5''' reactions in the full pathway | ||
* [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282] | * [[PWY-7282]], 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7282 PWY-7282] | ||
| − | |||
| − | |||
** '''6''' reactions found over '''9''' reactions in the full pathway | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| Line 51: | Line 51: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14908 14908] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072] | ** [http://www.genome.jp/dbget-bin/www_bget?R01072 R01072] | ||
| Line 87: | Line 87: | ||
** [http://www.uniprot.org/uniprot/P0AG16 P0AG16] | ** [http://www.uniprot.org/uniprot/P0AG16 P0AG16] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| − | |||
| − | |||
{{#set: ec number=EC-2.4.2.14}} | {{#set: ec number=EC-2.4.2.14}} | ||
| − | {{#set: gene associated=SJ15928|SJ20754 | + | {{#set: common name=amidophosphoribosyltransferase}} |
| − | {{#set: in pathway=PWY- | + | {{#set: common name=amidophosphoribosyl transferase}} |
| + | {{#set: gene associated=SJ04979|SJ15928|SJ20754}} | ||
| + | {{#set: in pathway=PWY-6277|PWY-6121|PWY-6122|PWY-7282}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 10:36, 10 January 2019
Contents
Reaction PRPPAMIDOTRANS-RXN
- direction:
- REVERSIBLE
- ec number:
- common name:
- amidophosphoribosyltransferase
- amidophosphoribosyl transferase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 5-phospho-β-D-ribosylamine[c] + 1 diphosphate[c] + 1 L-glutamate[c] <=> 1 L-glutamine[c] + 1 H2O[c] + 1 5-phospho-α-D-ribose 1-diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ04979
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ15928
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ20754
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6277, superpathway of 5-aminoimidazole ribonucleotide biosynthesis: PWY-6277
- 6 reactions found over 9 reactions in the full pathway
- PWY-6121, 5-aminoimidazole ribonucleotide biosynthesis I: PWY-6121
- 5 reactions found over 5 reactions in the full pathway
- PWY-6122, 5-aminoimidazole ribonucleotide biosynthesis II: PWY-6122
- 4 reactions found over 5 reactions in the full pathway
- PWY-7282, 4-amino-2-methyl-5-diphosphomethylpyrimidine biosynthesis (yeast): PWY-7282
- 6 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
