Difference between revisions of "ASNSYNB-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASNSYNB-RXN ASNSYNB-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparagine synthase (gl...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/6.3.5.4 EC-6.3.5.4] | ** [http://enzyme.expasy.org/EC/6.3.5.4 EC-6.3.5.4] | ||
| + | * common name: | ||
| + | ** L-aspartate:L-glutamine amido-ligase (AMP-forming) | ||
| + | ** asparagine synthase (glutamine-hydrolyzing) | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[GLN]][c] '''+''' 1 [[L-ASPARTATE]][c] '''+''' 1 [[ATP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ASN]][c] '''+''' 1 [[PPI]][c] '''+''' 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[GLT]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 L-glutamine[c] '''+''' 1 L-aspartate[c] '''+''' 1 ATP[c] '''+''' 1 H2O[c] '''=>''' 1 L-asparagine[c] '''+''' 1 diphosphate[c] '''+''' 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 L-glutamate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
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*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ13939]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
* Gene: [[SJ07729]] | * Gene: [[SJ07729]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
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** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
== Pathways == | == Pathways == | ||
* [[ASPARAGINE-BIOSYNTHESIS]], L-asparagine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-BIOSYNTHESIS ASPARAGINE-BIOSYNTHESIS] | * [[ASPARAGINE-BIOSYNTHESIS]], L-asparagine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-BIOSYNTHESIS ASPARAGINE-BIOSYNTHESIS] | ||
| Line 47: | Line 47: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12229 12229] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00578 R00578] | ** [http://www.genome.jp/dbget-bin/www_bget?R00578 R00578] | ||
| Line 81: | Line 83: | ||
** [http://www.uniprot.org/uniprot/Q9ZST7 Q9ZST7] | ** [http://www.uniprot.org/uniprot/Q9ZST7 Q9ZST7] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
| − | |||
{{#set: ec number=EC-6.3.5.4}} | {{#set: ec number=EC-6.3.5.4}} | ||
| − | {{#set: gene associated=SJ13639|SJ07729|SJ22095 | + | {{#set: common name=L-aspartate:L-glutamine amido-ligase (AMP-forming)}} |
| + | {{#set: common name=asparagine synthase (glutamine-hydrolyzing)}} | ||
| + | {{#set: gene associated=SJ13639|SJ13939|SJ07729|SJ22095}} | ||
{{#set: in pathway=ASPARAGINE-BIOSYNTHESIS}} | {{#set: in pathway=ASPARAGINE-BIOSYNTHESIS}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 11:14, 10 January 2019
Contents
Reaction ASNSYNB-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- L-aspartate:L-glutamine amido-ligase (AMP-forming)
- asparagine synthase (glutamine-hydrolyzing)
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 L-glutamine[c] + 1 L-aspartate[c] + 1 ATP[c] + 1 H2O[c] => 1 L-asparagine[c] + 1 diphosphate[c] + 1 AMP[c] + 1 H+[c] + 1 L-glutamate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ13639
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ13939
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07729
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ22095
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- ASPARAGINE-BIOSYNTHESIS, L-asparagine biosynthesis I: ASPARAGINE-BIOSYNTHESIS
- 1 reactions found over 1 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
