Difference between revisions of "PWY-1622"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-1622 PWY-1622] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...") |
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== Reaction(s) found == | == Reaction(s) found == | ||
| − | ''' | + | '''6''' reactions found over '''13''' reactions in the full pathway |
* [[2PGADEHYDRAT-RXN]] | * [[2PGADEHYDRAT-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
*** [[SJ08386]] | *** [[SJ08386]] | ||
*** [[SJ17529]] | *** [[SJ17529]] | ||
| + | *** [[SJ13450]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| − | *** [[ | + | *** [[annotation-saccharina_japonica_genome]] |
*** [[orthology-nannochloropsis_salina]] | *** [[orthology-nannochloropsis_salina]] | ||
| − | *** [[ | + | *** [[orthology-ectocarpus_siliculosus]] |
* [[GLYOHMETRANS-RXN]] | * [[GLYOHMETRANS-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| + | *** [[SJ15530]] | ||
*** [[SJ03668]] | *** [[SJ03668]] | ||
| − | |||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[HYDROXYPYRUVATE-REDUCTASE-RXN]] | * [[HYDROXYPYRUVATE-REDUCTASE-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 34: | Line 34: | ||
* [[MALATE-DEH-RXN]] | * [[MALATE-DEH-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| − | |||
| − | |||
*** [[SJ15746]] | *** [[SJ15746]] | ||
| + | *** [[SJ05075]] | ||
| + | *** [[SJ15523]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
* [[PEPCARBOX-RXN]] | * [[PEPCARBOX-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[SJ04004]] | *** [[SJ04004]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[RXN-15513]] | * [[RXN-15513]] | ||
** 6 associated gene(s): | ** 6 associated gene(s): | ||
*** [[SJ13678]] | *** [[SJ13678]] | ||
*** [[SJ14916]] | *** [[SJ14916]] | ||
| + | *** [[SJ21685]] | ||
| + | *** [[SJ09590]] | ||
*** [[SJ12497]] | *** [[SJ12497]] | ||
*** [[SJ15529]] | *** [[SJ15529]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
** 1 reconstruction source(s) associated: | ** 1 reconstruction source(s) associated: | ||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| Line 67: | Line 63: | ||
* [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN] | * [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802] | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-2802 RXN-2802] | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=RXN-2881 RXN-2881] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] | * [http://metacyc.org/META/NEW-IMAGE?object=SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN] | * [http://metacyc.org/META/NEW-IMAGE?object=SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN] | ||
| Line 72: | Line 69: | ||
{{#set: taxonomic range=TAX-2}} | {{#set: taxonomic range=TAX-2}} | ||
{{#set: common name=formaldehyde assimilation I (serine pathway)}} | {{#set: common name=formaldehyde assimilation I (serine pathway)}} | ||
| − | {{#set: reaction found= | + | {{#set: reaction found=6}} |
{{#set: total reaction=13}} | {{#set: total reaction=13}} | ||
| − | {{#set: completion rate= | + | {{#set: completion rate=46.0}} |
Latest revision as of 11:26, 10 January 2019
Pathway PWY-1622
- taxonomic range:
- common name:
- formaldehyde assimilation I (serine pathway)
- Synonym(s):
Reaction(s) found
6 reactions found over 13 reactions in the full pathway
- 2PGADEHYDRAT-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- GLYOHMETRANS-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- HYDROXYPYRUVATE-REDUCTASE-RXN
- 2 associated gene(s):
- 1 reconstruction source(s) associated:
- MALATE-DEH-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- PEPCARBOX-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- RXN-15513
Reaction(s) not found
- GKI-RXN
- MALATE--COA-LIGASE-RXN
- MALYL-COA-LYASE-RXN
- RXN-2802
- RXN-2881
- SERINE--GLYOXYLATE-AMINOTRANSFERASE-RXN
- SERINE-GLYOXYLATE-AMINOTRANSFERASE-RXN
