Difference between revisions of "3.1.4.17-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=3.1.4.17-RXN 3.1.4.17-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 3',5'-cyclic-nucleoti...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.1.4.17 EC-3.1.4.17] | ** [http://enzyme.expasy.org/EC/3.1.4.17 EC-3.1.4.17] | ||
| + | * common name: | ||
| + | ** 3',5'-cyclic-nucleotide phosphodiesterase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 17: | Line 17: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ04705]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
* Gene: [[SJ03999]] | * Gene: [[SJ03999]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 23: | Line 26: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | * Gene: [[ | + | * Gene: [[SJ09726]] |
| − | + | ||
| − | + | ||
| − | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
* Gene: [[SJ18680]] | * Gene: [[SJ18680]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ14526]] |
| − | + | ||
| − | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ10845]] | * Gene: [[SJ10845]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ14703]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| Line 53: | Line 53: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14654 14654] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259] | ** [http://www.genome.jp/dbget-bin/www_bget?R03259 R03259] | ||
| Line 90: | Line 90: | ||
** [http://www.uniprot.org/uniprot/Q63421 Q63421] | ** [http://www.uniprot.org/uniprot/Q63421 Q63421] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.1.4.17}} | {{#set: ec number=EC-3.1.4.17}} | ||
| − | {{#set: gene associated=SJ03999|SJ18679| | + | {{#set: common name=3',5'-cyclic-nucleotide phosphodiesterase}} |
| + | {{#set: gene associated=SJ04705|SJ03999|SJ18679|SJ09726|SJ18680|SJ14526|SJ10845|SJ14703}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 11:28, 10 January 2019
Contents
Reaction 3.1.4.17-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 3',5'-cyclic-nucleotide phosphodiesterase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Cyclic-3-5-Nucleoside-Monophosphates[c] + 1 WATER[c] => 1 Nucleoside-Monophosphates[c] + 1 PROTON[c]
- With common name(s):
- 1 a nucleoside cyclic 3',5'-monophosphate[c] + 1 H2O[c] => 1 a nucleoside 5'-monophosphate[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ04705
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03999
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18679
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09726
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18680
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14526
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10845
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14703
- Source: orthology-ectocarpus_siliculosus
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
