Difference between revisions of "RETINYL-PALMITATE-ESTERASE-RXN"

From metabolic_network
Jump to: navigation, search
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RETINYL-PALMITATE-ESTERASE-RXN RETINYL-PALMITATE-ESTERASE-RXN] == * direction: ** LEFT-TO-RIGHT * c...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
* common name:
 
* common name:
 
** retinyl-palmitate esterase
 
** retinyl-palmitate esterase
 
** carboxylic ester hydrolase
 
** carboxylic ester hydrolase
 
** all-trans-retinyl palmitate hydrolase
 
** all-trans-retinyl palmitate hydrolase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/3.1.1.1 EC-3.1.1.1]
 
 
* Synonym(s):
 
* Synonym(s):
 
** retinyl palmitate hydrolase
 
** retinyl palmitate hydrolase
Line 16: Line 16:
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[Retinols]][c] '''+''' 1 [[PALMITATE]][c]
+
** 1 [[WATER]][c] '''+''' 1 [[CHOCOLA_A]][c] '''=>''' 1 [[Retinols]][c] '''+''' 1 [[PALMITATE]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 H+[c] '''+''' 1 a retinol[c] '''+''' 1 palmitate[c]
+
** 1 H2O[c] '''+''' 1 all-trans-retinyl palmitate[c] '''=>''' 1 a retinol[c] '''+''' 1 palmitate[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ02498]]
+
* Gene: [[SJ02751]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20894]]
+
* Gene: [[SJ20900]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12255]]
+
* Gene: [[SJ05786]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ01789]]
+
* Gene: [[SJ16853]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19199]]
+
* Gene: [[SJ01235]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20890]]
+
* Gene: [[SJ11691]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03194]]
+
* Gene: [[SJ05432]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ02121]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ08366]]
+
* Gene: [[SJ03446]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11691]]
+
* Gene: [[SJ20897]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00011]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[SJ11538]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ21292]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ12220]]
 
* Gene: [[SJ12220]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19496]]
+
* Gene: [[SJ16813]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06461]]
+
* Gene: [[SJ04223]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16448]]
+
* Gene: [[SJ20890]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ01382]]
+
* Gene: [[SJ04988]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 78: Line 67:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00814]]
+
* Gene: [[SJ11538]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ21292]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ05814]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ18635]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ21109]]
+
* Gene: [[SJ00680]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20889]]
+
* Gene: [[SJ20894]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20898]]
+
* Gene: [[SJ02790]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18663]]
+
* Gene: [[SJ22328]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03481]]
+
* Gene: [[SJ03879]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ07027]]
+
* Gene: [[SJ16423]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11012]]
+
* Gene: [[SJ16448]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ10676]]
+
* Gene: [[SJ18547]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05786]]
+
* Gene: [[SJ20895]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05432]]
+
* Gene: [[SJ16362]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19560]]
+
* Gene: [[SJ19496]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19511]]
+
* Gene: [[SJ08366]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03173]]
+
* Gene: [[SJ06461]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20250]]
+
* Gene: [[SJ01789]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ01354]]
+
* Gene: [[SJ01382]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16853]]
+
* Gene: [[SJ20977]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20900]]
+
* Gene: [[SJ19104]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20977]]
+
* Gene: [[SJ19560]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05960]]
+
* Gene: [[SJ01354]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16427]]
+
* Gene: [[SJ09079]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04223]]
+
* Gene: [[SJ20250]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04408]]
+
* Gene: [[SJ12478]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03879]]
+
* Gene: [[SJ05960]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ10585]]
+
* Gene: [[SJ03481]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12222]]
+
* Gene: [[SJ19121]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ13501]]
+
* Gene: [[SJ21874]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ02841]]
+
* Gene: [[SJ12255]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03446]]
+
* Gene: [[SJ20892]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ22328]]
+
* Gene: [[SJ09205]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12662]]
+
* Gene: [[SJ21109]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20888]]
+
* Gene: [[SJ02498]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ03174]]
+
* Gene: [[SJ00011]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20899]]
+
* Gene: [[SJ20884]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20892]]
+
* Gene: [[SJ12662]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ09205]]
+
* Gene: [[SJ18074]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16362]]
+
* Gene: [[SJ07752]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12478]]
+
* Gene: [[SJ20898]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ01235]]
+
* Gene: [[SJ20889]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16813]]
+
* Gene: [[SJ10585]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ07752]]
+
* Gene: [[SJ05104]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ02790]]
+
* Gene: [[SJ03174]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18009]]
+
* Gene: [[SJ11012]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ09079]]
+
* Gene: [[SJ20888]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18547]]
+
* Gene: [[SJ02121]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20895]]
+
* Gene: [[SJ04408]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ19104]]
+
* Gene: [[SJ00346]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20887]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ13501]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ09888]]
+
* Gene: [[SJ18316]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00346]]
+
* Gene: [[SJ18009]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ20899]]
−
* Gene: [[SJ00680]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05104]]
+
* Gene: [[SJ19511]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04395]]
+
* Gene: [[SJ03173]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18074]]
+
* Gene: [[SJ12222]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16423]]
+
* Gene: [[SJ15519]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ15654]]
+
* Gene: [[SJ04395]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18316]]
+
* Gene: [[SJ10676]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20891]]
+
* Gene: [[SJ05105]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04988]]
+
* Gene: [[SJ09625]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20884]]
+
* Gene: [[SJ20887]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ12219]]
+
* Gene: [[SJ16361]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ15519]]
+
* Gene: [[SJ20891]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ20897]]
+
* Gene: [[SJ02841]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ09625]]
+
* Gene: [[SJ18663]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ22570]]
+
* Gene: [[SJ07027]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05814]]
+
* Gene: [[SJ19199]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ19121]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ21874]]
+
* Gene: [[SJ09888]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ16361]]
+
* Gene: [[SJ22570]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ02751]]
+
* Gene: [[SJ00814]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05105]]
+
* Gene: [[SJ03194]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ16427]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 294: Line 291:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ18635]]
+
* Gene: [[SJ12219]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ15654]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 307: Line 307:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21508 21508]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21509 21509]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-3.1.1.1}}
 
{{#set: common name=retinyl-palmitate esterase}}
 
{{#set: common name=retinyl-palmitate esterase}}
 
{{#set: common name=carboxylic ester hydrolase}}
 
{{#set: common name=carboxylic ester hydrolase}}
 
{{#set: common name=all-trans-retinyl palmitate hydrolase}}
 
{{#set: common name=all-trans-retinyl palmitate hydrolase}}
−
{{#set: ec number=EC-3.1.1.1}}
 
 
{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
 
{{#set: common name=retinyl palmitate hydrolase|retinyl palmitate hydrolyase|retinyl ester hydrolase}}
−
{{#set: gene associated=SJ02498|SJ20894|SJ12255|SJ01789|SJ19199|SJ20890|SJ03194|SJ02121|SJ08366|SJ11691|SJ00011|SJ11538|SJ21292|SJ12220|SJ19496|SJ06461|SJ16448|SJ01382|SJ15522|SJ00814|SJ21109|SJ20889|SJ20898|SJ18663|SJ03481|SJ07027|SJ11012|SJ10676|SJ05786|SJ05432|SJ19560|SJ19511|SJ03173|SJ20250|SJ01354|SJ16853|SJ20900|SJ20977|SJ05960|SJ16427|SJ04223|SJ04408|SJ03879|SJ10585|SJ12222|SJ13501|SJ02841|SJ03446|SJ22328|SJ12662|SJ20888|SJ03174|SJ20899|SJ20892|SJ09205|SJ16362|SJ12478|SJ01235|SJ16813|SJ07752|SJ02790|SJ18009|SJ09079|SJ18547|SJ20895|SJ19104|SJ20887|SJ09888|SJ00346|SJ00680|SJ05104|SJ04395|SJ18074|SJ16423|SJ15654|SJ18316|SJ20891|SJ04988|SJ20884|SJ12219|SJ15519|SJ20897|SJ09625|SJ22570|SJ05814|SJ19121|SJ21874|SJ16361|SJ02751|SJ05105|SJ14819|SJ18635}}
+
{{#set: gene associated=SJ02751|SJ20900|SJ05786|SJ16853|SJ01235|SJ11691|SJ05432|SJ03446|SJ20897|SJ12220|SJ16813|SJ04223|SJ20890|SJ04988|SJ15522|SJ11538|SJ21292|SJ05814|SJ18635|SJ00680|SJ20894|SJ02790|SJ22328|SJ03879|SJ16423|SJ16448|SJ18547|SJ20895|SJ16362|SJ19496|SJ08366|SJ06461|SJ01789|SJ01382|SJ20977|SJ19104|SJ19560|SJ01354|SJ09079|SJ20250|SJ12478|SJ05960|SJ03481|SJ19121|SJ21874|SJ12255|SJ20892|SJ09205|SJ21109|SJ02498|SJ00011|SJ20884|SJ12662|SJ18074|SJ07752|SJ20898|SJ20889|SJ10585|SJ05104|SJ03174|SJ11012|SJ20888|SJ02121|SJ04408|SJ00346|SJ13501|SJ18316|SJ18009|SJ20899|SJ19511|SJ03173|SJ12222|SJ15519|SJ04395|SJ10676|SJ05105|SJ09625|SJ20887|SJ16361|SJ20891|SJ02841|SJ18663|SJ07027|SJ19199|SJ09888|SJ22570|SJ00814|SJ03194|SJ16427|SJ14819|SJ12219|SJ15654}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 11:29, 10 January 2019

Reaction RETINYL-PALMITATE-ESTERASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • retinyl-palmitate esterase
    • carboxylic ester hydrolase
    • all-trans-retinyl palmitate hydrolase
  • Synonym(s):
    • retinyl palmitate hydrolase
    • retinyl palmitate hydrolyase
    • retinyl ester hydrolase

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 H2O[c] + 1 all-trans-retinyl palmitate[c] => 1 a retinol[c] + 1 palmitate[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RETINYL-PALMITATE-ESTERASE-RXN&oldid=15284"