Difference between revisions of "R222-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=R222-RXN R222-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 1-octanal dehydrogenase (NAD+...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
* common name:
 
* common name:
 
** 1-octanal dehydrogenase (NAD+)
 
** 1-octanal dehydrogenase (NAD+)
 
** aldehyde dehydrogenase (NAD)
 
** aldehyde dehydrogenase (NAD)
 
** 4-trimethylaminobutyraldehyde dehydrogenase
 
** 4-trimethylaminobutyraldehyde dehydrogenase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/1.2.1.3 EC-1.2.1.3]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[CPD-371]][c] '''+''' 1 [[NAD]][c] '''=>''' 2 [[PROTON]][c] '''+''' 1 [[CPD-195]][c] '''+''' 1 [[NADH]][c]
+
** 1 [[CPD-371]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[NADH]][c] '''+''' 1 [[CPD-195]][c] '''+''' 2 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 1-octanal[c] '''+''' 1 NAD+[c] '''=>''' 2 H+[c] '''+''' 1 octanoate[c] '''+''' 1 NADH[c]
+
** 1 1-octanal[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 NADH[c] '''+''' 1 octanoate[c] '''+''' 2 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ11330]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
* Gene: [[SJ11331]]
 
* Gene: [[SJ11331]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ17249]]
+
* Gene: [[SJ06047]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
* Gene: [[SJ22552]]
 
* Gene: [[SJ22552]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ06470]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ05897]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ11330]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 34: Line 40:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00435]]
+
* Gene: [[SJ09287]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 40: Line 46:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ06047]]
+
* Gene: [[SJ06359]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05897]]
+
* Gene: [[SJ17249]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06359]]
+
* Gene: [[SJ00435]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ06470]]
+
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[SJ09287]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 64: Line 64:
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.2.1.3}}
 
{{#set: common name=1-octanal dehydrogenase (NAD+)}}
 
{{#set: common name=1-octanal dehydrogenase (NAD+)}}
 
{{#set: common name=aldehyde dehydrogenase (NAD)}}
 
{{#set: common name=aldehyde dehydrogenase (NAD)}}
 
{{#set: common name=4-trimethylaminobutyraldehyde dehydrogenase}}
 
{{#set: common name=4-trimethylaminobutyraldehyde dehydrogenase}}
−
{{#set: ec number=EC-1.2.1.3}}
+
{{#set: gene associated=SJ11331|SJ06047|SJ22552|SJ06470|SJ05897|SJ11330|SJ10107|SJ09287|SJ06456|SJ06359|SJ17249|SJ00435}}
−
{{#set: gene associated=SJ11330|SJ11331|SJ17249|SJ22552|SJ10107|SJ00435|SJ06456|SJ06047|SJ05897|SJ06359|SJ06470|SJ09287}}
+
 
{{#set: in pathway=P221-PWY}}
 
{{#set: in pathway=P221-PWY}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 11:44, 10 January 2019

Reaction R222-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 1-octanal dehydrogenase (NAD+)
    • aldehyde dehydrogenase (NAD)
    • 4-trimethylaminobutyraldehyde dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 1-octanal[c] + 1 NAD+[c] + 1 H2O[c] => 1 NADH[c] + 1 octanoate[c] + 2 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P221-PWY, octane oxidation: P221-PWY
    • 3 reactions found over 5 reactions in the full pathway

Reconstruction information

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=R222-RXN&oldid=15787"