Difference between revisions of "RXN-14026"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-14026 RXN-14026] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase ** CMP phos...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.1.3.91 EC-3.1.3.91] | ** [http://enzyme.expasy.org/EC/3.1.3.91 EC-3.1.3.91] | ||
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5] | ** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5] | ||
| + | * common name: | ||
| + | ** CMP phosphatase | ||
| + | ** 5'-nucleotidase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ | + | ** 1 [[CMP]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[CYTIDINE]][c] '''+''' 1 [[Pi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 CMP[c] '''+''' 1 H2O[c] '''=>''' 1 | + | ** 1 CMP[c] '''+''' 1 H2O[c] '''=>''' 1 cytidine[c] '''+''' 1 phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ16098]] | * Gene: [[SJ16098]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 30: | Line 26: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | * Gene: [[ | + | * Gene: [[SJ18402]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 37: | Line 33: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| + | * Gene: [[SJ15366]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185] | * [[PWY-7185]], UTP and CTP dephosphorylation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7185 PWY-7185] | ||
| Line 53: | Line 53: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00511 R00511] | ** [http://www.genome.jp/dbget-bin/www_bget?R00511 R00511] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
| − | |||
{{#set: ec number=EC-3.1.3.91}} | {{#set: ec number=EC-3.1.3.91}} | ||
{{#set: ec number=EC-3.1.3.5}} | {{#set: ec number=EC-3.1.3.5}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=CMP phosphatase}} |
| + | {{#set: common name=5'-nucleotidase}} | ||
| + | {{#set: gene associated=SJ16098|SJ18895|SJ18402|SJ09030|SJ15366}} | ||
{{#set: in pathway=PWY-7185}} | {{#set: in pathway=PWY-7185}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 12:10, 10 January 2019
Contents
Reaction RXN-14026
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- CMP phosphatase
- 5'-nucleotidase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 CMP[c] + 1 H2O[c] => 1 cytidine[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ16098
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18895
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18402
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09030
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ15366
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7185, UTP and CTP dephosphorylation I: PWY-7185
- 5 reactions found over 5 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
