Difference between revisions of "RUMP-PWY"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-2 TAX-2] *...") |
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| Line 6: | Line 6: | ||
** formaldehyde oxidation I | ** formaldehyde oxidation I | ||
* Synonym(s): | * Synonym(s): | ||
| + | ** dissimilatory RUMP cycle | ||
== Reaction(s) found == | == Reaction(s) found == | ||
| Line 11: | Line 12: | ||
* [[6PGLUCONOLACT-RXN]] | * [[6PGLUCONOLACT-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| − | |||
*** [[SJ07027]] | *** [[SJ07027]] | ||
| + | *** [[SJ10585]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[GLU6PDEHYDROG-RXN]] | * [[GLU6PDEHYDROG-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[SJ11913]] | *** [[SJ11913]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[PGLUCISOM-RXN]] | * [[PGLUCISOM-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 29: | Line 30: | ||
*** [[SJ08179]] | *** [[SJ08179]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[RXN-3341]] | * [[RXN-3341]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
| Line 42: | Line 43: | ||
{{#set: taxonomic range=TAX-2}} | {{#set: taxonomic range=TAX-2}} | ||
{{#set: common name=formaldehyde oxidation I}} | {{#set: common name=formaldehyde oxidation I}} | ||
| + | {{#set: common name=dissimilatory RUMP cycle}} | ||
{{#set: reaction found=4}} | {{#set: reaction found=4}} | ||
{{#set: total reaction=6}} | {{#set: total reaction=6}} | ||
{{#set: completion rate=67.0}} | {{#set: completion rate=67.0}} | ||
Latest revision as of 12:33, 10 January 2019
Pathway RUMP-PWY
- taxonomic range:
- common name:
- formaldehyde oxidation I
- Synonym(s):
- dissimilatory RUMP cycle
Reaction(s) found
4 reactions found over 6 reactions in the full pathway
- 6PGLUCONOLACT-RXN
- 2 associated gene(s):
- 4 reconstruction source(s) associated:
- GLU6PDEHYDROG-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- PGLUCISOM-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- RXN-3341
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
