Difference between revisions of "RXN-9679"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9679 RXN-9679] == * direction: ** LEFT-TO-RIGHT * common name: ** sarcosine N-methyltransferase...") |
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== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** 1 [[ | + | ** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[SARCOSINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[DIMETHYL-GLYCINE]][c] |
* With common name(s): | * With common name(s): | ||
− | ** 1 | + | ** 1 S-adenosyl-L-methionine[c] '''+''' 1 sarcosine[c] '''=>''' 1 H+[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 N,N-dimethylglycine[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
− | * Gene: [[ | + | * Gene: [[SJ11087]] |
+ | ** Source: [[annotation-saccharina_japonica_genome]] | ||
+ | *** Assignment: EC-NUMBER | ||
+ | * Gene: [[SJ12128]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
Line 37: | Line 40: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | * Gene: [[ | + | * Gene: [[SJ14716]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | * Gene: [[ | + | * Gene: [[SJ12119]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | * Gene: [[ | + | * Gene: [[SJ10116]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
Line 52: | Line 55: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | * Gene: [[ | + | * Gene: [[SJ18177]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
− | * Gene: [[ | + | * Gene: [[SJ12118]] |
− | + | ||
− | + | ||
− | + | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
− | |||
− | |||
* [[P541-PWY]], glycine betaine biosynthesis IV (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=P541-PWY P541-PWY] | * [[P541-PWY]], glycine betaine biosynthesis IV (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=P541-PWY P541-PWY] | ||
+ | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6004]], glycine betaine biosynthesis V (from glycine): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6004 PWY-6004] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
Line 72: | Line 72: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
− | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15454 15454] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07243 R07243] | ** [http://www.genome.jp/dbget-bin/www_bget?R07243 R07243] | ||
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{{#set: common name=sarcosine-dimethylglycine methyltransferase}} | {{#set: common name=sarcosine-dimethylglycine methyltransferase}} | ||
{{#set: common name=S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase|sarcosine dimethylglycine N-methyltransferase|SDMT|ApDMT|ApGSMT|glycine-sarcosine methyltransferase|GSMT|GMT|glycine sarcosine N-methyltransferase|S-adenosyl-L-methionine:sarcosine N-methyltransferase|GSDMT|glycine sarcosine dimethylglycine N-methyltransferase}} | {{#set: common name=S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase|sarcosine dimethylglycine N-methyltransferase|SDMT|ApDMT|ApGSMT|glycine-sarcosine methyltransferase|GSMT|GMT|glycine sarcosine N-methyltransferase|S-adenosyl-L-methionine:sarcosine N-methyltransferase|GSDMT|glycine sarcosine dimethylglycine N-methyltransferase}} | ||
− | {{#set: gene associated= | + | {{#set: gene associated=SJ11087|SJ12128|SJ02540|SJ02539|SJ14716|SJ12119|SJ10116|SJ12116|SJ03081|SJ18177|SJ12118}} |
− | {{#set: in pathway= | + | {{#set: in pathway=P541-PWY|PWY-6004}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 11:44, 10 January 2019
Contents
Reaction RXN-9679
- direction:
- LEFT-TO-RIGHT
- common name:
- sarcosine N-methyltransferase
- sarcosine-dimethylglycine methyltransferase
- Synonym(s):
- S-adenosyl-L-methionine:N,N-dimethylglycine N-methyltransferase
- sarcosine dimethylglycine N-methyltransferase
- SDMT
- ApDMT
- ApGSMT
- glycine-sarcosine methyltransferase
- GSMT
- GMT
- glycine sarcosine N-methyltransferase
- S-adenosyl-L-methionine:sarcosine N-methyltransferase
- GSDMT
- glycine sarcosine dimethylglycine N-methyltransferase
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 SARCOSINE[c] => 1 PROTON[c] + 1 ADENOSYL-HOMO-CYS[c] + 1 DIMETHYL-GLYCINE[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 sarcosine[c] => 1 H+[c] + 1 S-adenosyl-L-homocysteine[c] + 1 N,N-dimethylglycine[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ11087
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ12128
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ02540
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ02539
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14716
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ12119
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10116
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ12116
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03081
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ18177
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ12118
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- P541-PWY, glycine betaine biosynthesis IV (from glycine): P541-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-6004, glycine betaine biosynthesis V (from glycine): PWY-6004
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links