Difference between revisions of "XMPXAN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=XMPXAN-RXN XMPXAN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 5'-nucleotidase ** XMP ph...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 5'-nucleotidase
 
−
** XMP phosphohydrolase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 
** [http://enzyme.expasy.org/EC/3.1.3.5 EC-3.1.3.5]
 +
* common name:
 +
** XMP phosphohydrolase
 +
** 5'-nucleotidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''=>''' 1 [[XANTHOSINE]][c] '''+''' 1 [[Pi]][c]
+
** 1 [[XANTHOSINE-5-PHOSPHATE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHOSINE]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 XMP[c] '''=>''' 1 xanthosine[c] '''+''' 1 phosphate[c]
+
** 1 XMP[c] '''+''' 1 H2O[c] '''=>''' 1 xanthosine[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ09030]]
+
* Gene: [[SJ15366]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ16098]]
 
* Gene: [[SJ16098]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
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** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ18402]]
 
* Gene: [[SJ18402]]
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ15366]]
 
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
Line 36: Line 33:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ09030]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-5695]], urate biosynthesis/inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 
−
** '''4''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 
* [[PWY-6596]], adenosine nucleotides degradation I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6596 PWY-6596]
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 
** '''7''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5695]], inosine 5'-phosphate degradation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5695 PWY-5695]
 +
** '''4''' reactions found over '''4''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28530 28530]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=28531 28531]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02719 R02719]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=5'-nucleotidase}}
 
−
{{#set: common name=XMP phosphohydrolase}}
 
 
{{#set: ec number=EC-3.1.3.5}}
 
{{#set: ec number=EC-3.1.3.5}}
−
{{#set: gene associated=SJ09030|SJ16098|SJ18402|SJ15366|SJ18895}}
+
{{#set: common name=XMP phosphohydrolase}}
−
{{#set: in pathway=PWY-5695|PWY-6596}}
+
{{#set: common name=5'-nucleotidase}}
 +
{{#set: gene associated=SJ15366|SJ16098|SJ18402|SJ18895|SJ09030}}
 +
{{#set: in pathway=PWY-6596|PWY-5695}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:35, 10 January 2019

Reaction XMPXAN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • XMP phosphohydrolase
    • 5'-nucleotidase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • PWY-5695, inosine 5'-phosphate degradation: PWY-5695
    • 4 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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