Difference between revisions of "RXN-9003"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9003 RXN-9003] == * direction: ** LEFT-TO-RIGHT * ec number: ** [http://enzyme.expasy.org/EC/2....") |
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== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ10781]] |
| − | + | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* Gene: [[SJ10418]] | * Gene: [[SJ10418]] | ||
| + | ** Source: [[orthology-arabidopsis_thaliana]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ04442]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ03479]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ19255]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19] | * [[PWY3O-19]], ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-19 PWY3O-19] | ||
| Line 42: | Line 42: | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=44557 44557] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616] | ** [http://www.genome.jp/dbget-bin/www_bget?R05616 R05616] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: ec number=EC-2.5.1.39}} | {{#set: ec number=EC-2.5.1.39}} | ||
| − | {{#set: gene associated= | + | {{#set: gene associated=SJ10781|SJ10418|SJ04442|SJ03479|SJ19255}} |
{{#set: in pathway=PWY3O-19|PWY-7235}} | {{#set: in pathway=PWY3O-19|PWY-7235}} | ||
{{#set: reconstruction category=orthology}} | {{#set: reconstruction category=orthology}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus}} | ||
{{#set: reconstruction tool=pantograph}} | {{#set: reconstruction tool=pantograph}} | ||
Latest revision as of 13:37, 10 January 2019
Contents
Reaction RXN-9003
- direction:
- LEFT-TO-RIGHT
- ec number:
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ALL-TRANS-HEXAPRENYL-DIPHOSPHATE[c] + 1 4-hydroxybenzoate[c] => 1 3-HEXAPRENYL-4-HYDROXYBENZOATE[c] + 1 PPI[c]
- With common name(s):
- 1 all-trans-hexaprenyl diphosphate[c] + 1 4-hydroxybenzoate[c] => 1 3-hexaprenyl-4-hydroxybenzoate[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10781
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ10418
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ04442
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ03479
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ19255
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY3O-19, ubiquinol-6 biosynthesis from 4-hydroxybenzoate (eukaryotic): PWY3O-19
- 4 reactions found over 8 reactions in the full pathway
- PWY-7235, superpathway of ubiquinol-6 biosynthesis (eukaryotic): PWY-7235
- 3 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
External links
