Difference between revisions of "ASPARAGHYD-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGHYD-RXN ASPARAGHYD-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** asparaginase * ec...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38] | ** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38] | ||
** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1] | ** [http://enzyme.expasy.org/EC/3.5.1.1 EC-3.5.1.1] | ||
| + | * common name: | ||
| + | ** asparaginase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 18: | Line 18: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ17531]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ09511]] | * Gene: [[SJ09511]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY] | * [[ASPASN-PWY]], superpathway of L-aspartate and L-asparagine biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=ASPASN-PWY ASPASN-PWY] | ||
** '''4''' reactions found over '''7''' reactions in the full pathway | ** '''4''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[ASPARAGINE-DEG1-PWY]], L-asparagine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY ASPARAGINE-DEG1-PWY] | ||
| + | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
* [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1] | * [[ASPARAGINE-DEG1-PWY-1]], L-asparagine degradation III (mammalian): [http://metacyc.org/META/NEW-IMAGE?object=ASPARAGINE-DEG1-PWY-1 ASPARAGINE-DEG1-PWY-1] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 43: | Line 43: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21017 21017] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485] | ** [http://www.genome.jp/dbget-bin/www_bget?R00485 R00485] | ||
| Line 71: | Line 71: | ||
** [http://www.uniprot.org/uniprot/P0A962 P0A962] | ** [http://www.uniprot.org/uniprot/P0A962 P0A962] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.5.1.38}} | {{#set: ec number=EC-3.5.1.38}} | ||
{{#set: ec number=EC-3.5.1.1}} | {{#set: ec number=EC-3.5.1.1}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=asparaginase}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=SJ17531|SJ09511}} |
| + | {{#set: in pathway=ASPASN-PWY|ASPARAGINE-DEG1-PWY|ASPARAGINE-DEG1-PWY-1}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 12:38, 10 January 2019
Contents
Reaction ASPARAGHYD-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- asparaginase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 ASN[c] + 1 WATER[c] => 1 L-ASPARTATE[c] + 1 AMMONIUM[c]
- With common name(s):
- 1 L-asparagine[c] + 1 H2O[c] => 1 L-aspartate[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ17531
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ09511
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- ASPASN-PWY, superpathway of L-aspartate and L-asparagine biosynthesis: ASPASN-PWY
- 4 reactions found over 7 reactions in the full pathway
- ASPARAGINE-DEG1-PWY, L-asparagine degradation I: ASPARAGINE-DEG1-PWY
- 1 reactions found over 1 reactions in the full pathway
- ASPARAGINE-DEG1-PWY-1, L-asparagine degradation III (mammalian): ASPARAGINE-DEG1-PWY-1
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
