Difference between revisions of "SJ06456"

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(Created page with "Category:Gene == Gene SJ06456 == * right end position: ** 48229 * transcription direction: ** POSITIVE * left end position: ** 23153 * centisome position: ** 4.8691187...")
 
 
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[[Category:Gene]]
 
[[Category:Gene]]
 
== Gene SJ06456 ==
 
== Gene SJ06456 ==
−
* right end position:
 
−
** 48229
 
 
* transcription direction:
 
* transcription direction:
 
** POSITIVE
 
** POSITIVE
 +
* right end position:
 +
** 48229
 
* left end position:
 
* left end position:
 
** 23153
 
** 23153
Line 32: Line 32:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
 
* Reaction: [[BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 46: Line 46:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-10715]]
 
* Reaction: [[RXN-10715]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-10717]]
 
* Reaction: [[RXN-10717]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 59: Line 59:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-10912]]
 
* Reaction: [[RXN-10912]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 74: Line 74:
 
*** Assignment: go-term
 
*** Assignment: go-term
 
* Reaction: [[RXN-14209]]
 
* Reaction: [[RXN-14209]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-14224]]
 
* Reaction: [[RXN-14224]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-14225]]
 
* Reaction: [[RXN-14225]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-14280]]
 
* Reaction: [[RXN-14280]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-16653]]
 
* Reaction: [[RXN-16653]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 112: Line 112:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: ec-number
 
*** Assignment: ec-number
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-4142]]
 
* Reaction: [[RXN-4142]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 126: Line 126:
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-6382]]
 
* Reaction: [[RXN-6382]]
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-8582]]
 
* Reaction: [[RXN-8582]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 156: Line 156:
 
*** Assignment: ec-number
 
*** Assignment: ec-number
 
== Pathways associated ==
 
== Pathways associated ==
 +
* [[PWY-7178]]
 +
* [[PWY-5760]]
 
* [[P221-PWY]]
 
* [[P221-PWY]]
 +
* [[PWY6666-2]]
 +
* [[PWY-1501]]
 +
* [[PWY-6342]]
 +
* [[PWY-6763]]
 +
* [[PWY-5429]]
 +
* [[PWY-7431]]
 +
* [[PWY-6181]]
 
* [[PWY-7387]]
 
* [[PWY-7387]]
 +
* [[PWY-3981]]
 +
* [[PWY66-162]]
 +
* [[PWY-6307]]
 
* [[PWY-6054]]
 
* [[PWY-6054]]
−
* [[PWY-6055]]
+
* [[PWY-6313]]
−
* [[PWY-2501]]
+
* [[PWY-2221]]
 
* [[PWY-6446]]
 
* [[PWY-6446]]
−
* [[PWY-6307]]
+
* [[PWY-6104]]
−
* [[PWY-3162]]
+
−
* [[PWY-2724]]
+
−
* [[PWY-6342]]
+
 
* [[PWY-6444]]
 
* [[PWY-6444]]
−
* [[PWY66-161]]
+
* [[PWY-2724]]
−
* [[PWY66-21]]
+
* [[FAO-PWY]]
−
* [[PWY66-162]]
+
−
* [[PWY-7178]]
+
−
* [[PWY-6763]]
+
 
* [[PWY-6766]]
 
* [[PWY-6766]]
 +
* [[PWY66-389]]
 
* [[PWY-7269]]
 
* [[PWY-7269]]
 +
* [[PWY66-387]]
 +
* [[PWY-2501]]
 +
* [[PWY-5428]]
 +
* [[PWY66-161]]
 +
* [[PWY-3162]]
 
* [[TOLUENE-DEG-CATECHOL-PWY]]
 
* [[TOLUENE-DEG-CATECHOL-PWY]]
−
* [[PWY-7431]]
 
−
* [[FAO-PWY]]
 
 
* [[PWY-3641]]
 
* [[PWY-3641]]
−
* [[PWY-5428]]
+
* [[PWY-6055]]
−
* [[PWY-5429]]
+
* [[PWY66-388]]
 
* [[PWY-0]]
 
* [[PWY-0]]
−
* [[PWY-6181]]
+
* [[PWY66-21]]
−
* [[PWY-5760]]
+
−
* [[PWY-6313]]
+
−
* [[PWY-2221]]
+
−
* [[PWY-3981]]
+
−
* [[PWY-1501]]
+
−
* [[PWY66-388]]
+
−
* [[PWY6666-2]]
+
−
* [[PWY66-387]]
+
−
* [[PWY66-389]]
+
−
* [[PWY-6104]]
+
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=48229}}
 
 
{{#set: transcription direction=POSITIVE}}
 
{{#set: transcription direction=POSITIVE}}
 +
{{#set: right end position=48229}}
 
{{#set: left end position=23153}}
 
{{#set: left end position=23153}}
 
{{#set: centisome position=4.8691187    }}
 
{{#set: centisome position=4.8691187    }}
 
{{#set: reaction associated=ACYLCOADEHYDROG-RXN|ALCOHOL-DEHYDROGENASE-NADP+-RXN|ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN|ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN|ALDEHYDE-DEHYDROGENASE-NADP+-RXN|ALDHDEHYDROG-RXN|BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|R222-RXN|RXN-10089|RXN-10715|RXN-10717|RXN-10780|RXN-10912|RXN-10917|RXN-12484|RXN-14023|RXN-14209|RXN-14224|RXN-14225|RXN-14280|RXN-16653|RXN-16654|RXN-16655|RXN-16656|RXN-17808|RXN-3443|RXN-37|RXN-4142|RXN-5581|RXN-6002|RXN-6382|RXN-8582|RXN-8583|RXN-9758|RXN-9910|RXN66-3|RXN66-472|RXN66-476|RXN66-479|RXN6666-5}}
 
{{#set: reaction associated=ACYLCOADEHYDROG-RXN|ALCOHOL-DEHYDROGENASE-NADP+-RXN|ALCOHOL-DEHYDROGENASE-NADPORNOP+-RXN|ALDEHYDE-DEHYDROGENASE-NADORNOP+-RXN|ALDEHYDE-DEHYDROGENASE-NADP+-RXN|ALDHDEHYDROG-RXN|BENZALDEHYDE-DEHYDROGENASE-NAD+-RXN|LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN|R222-RXN|RXN-10089|RXN-10715|RXN-10717|RXN-10780|RXN-10912|RXN-10917|RXN-12484|RXN-14023|RXN-14209|RXN-14224|RXN-14225|RXN-14280|RXN-16653|RXN-16654|RXN-16655|RXN-16656|RXN-17808|RXN-3443|RXN-37|RXN-4142|RXN-5581|RXN-6002|RXN-6382|RXN-8582|RXN-8583|RXN-9758|RXN-9910|RXN66-3|RXN66-472|RXN66-476|RXN66-479|RXN6666-5}}
−
{{#set: pathway associated=P221-PWY|PWY-7387|PWY-6054|PWY-6055|PWY-2501|PWY-6446|PWY-6307|PWY-3162|PWY-2724|PWY-6342|PWY-6444|PWY66-161|PWY66-21|PWY66-162|PWY-7178|PWY-6763|PWY-6766|PWY-7269|TOLUENE-DEG-CATECHOL-PWY|PWY-7431|FAO-PWY|PWY-3641|PWY-5428|PWY-5429|PWY-0|PWY-6181|PWY-5760|PWY-6313|PWY-2221|PWY-3981|PWY-1501|PWY66-388|PWY6666-2|PWY66-387|PWY66-389|PWY-6104}}
+
{{#set: pathway associated=PWY-7178|PWY-5760|P221-PWY|PWY6666-2|PWY-1501|PWY-6342|PWY-6763|PWY-5429|PWY-7431|PWY-6181|PWY-7387|PWY-3981|PWY66-162|PWY-6307|PWY-6054|PWY-6313|PWY-2221|PWY-6446|PWY-6104|PWY-6444|PWY-2724|FAO-PWY|PWY-6766|PWY66-389|PWY-7269|PWY66-387|PWY-2501|PWY-5428|PWY66-161|PWY-3162|TOLUENE-DEG-CATECHOL-PWY|PWY-3641|PWY-6055|PWY66-388|PWY-0|PWY66-21}}

Latest revision as of 12:52, 10 January 2019

Gene SJ06456

  • transcription direction:
    • POSITIVE
  • right end position:
    • 48229
  • left end position:
    • 23153
  • centisome position:
    • 4.8691187
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=SJ06456&oldid=17935"