Difference between revisions of "TYROSINE-AMINOTRANSFERASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TYROSINE-AMINOTRANSFERASE-RXN TYROSINE-AMINOTRANSFERASE-RXN] == * direction: ** REVERSIBLE * common...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** REVERSIBLE
 
** REVERSIBLE
−
* common name:
 
−
** L-phenylalanine:2-oxoglutarate aminotransferase
 
−
** L-tyrosine:2-oxoglutarate aminotransferase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
 
** [http://enzyme.expasy.org/EC/2.6.1.57 EC-2.6.1.57]
 
** [http://enzyme.expasy.org/EC/2.6.1.5 EC-2.6.1.5]
 
** [http://enzyme.expasy.org/EC/2.6.1.5 EC-2.6.1.5]
 +
* common name:
 +
** L-phenylalanine:2-oxoglutarate aminotransferase
 +
** L-tyrosine:2-oxoglutarate aminotransferase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[2-KETOGLUTARATE]][c] '''+''' 1 [[TYR]][c] '''<=>''' 1 [[GLT]][c] '''+''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c]
+
** 1 [[TYR]][c] '''+''' 1 [[2-KETOGLUTARATE]][c] '''<=>''' 1 [[P-HYDROXY-PHENYLPYRUVATE]][c] '''+''' 1 [[GLT]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 2-oxoglutarate[c] '''+''' 1 L-tyrosine[c] '''<=>''' 1 L-glutamate[c] '''+''' 1 4-hydroxyphenylpyruvate[c]
+
** 1 L-tyrosine[c] '''+''' 1 2-oxoglutarate[c] '''<=>''' 1 4-hydroxyphenylpyruvate[c] '''+''' 1 L-glutamate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ05778]]
+
* Gene: [[SJ07466]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ20943]]
+
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
−
* Gene: [[SJ07466]]
+
* Gene: [[SJ07646]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
Line 35: Line 32:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ07646]]
+
* Gene: [[SJ05778]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ20943]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 42: Line 42:
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
 
−
** '''6''' reactions found over '''11''' reactions in the full pathway
 
−
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
 
−
** '''2''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5886]], 4-hydroxyphenylpyruvate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5886 PWY-5886]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
 
* [[PWY-5151]], L-tyrosine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151]
 
* [[PWY-5151]], L-tyrosine degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5151 PWY-5151]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7518]], atromentin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7518 PWY-7518]
+
* [[PWY-5048]], rosmarinic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5048 PWY-5048]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''1''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-3581]], (S)-reticuline biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3581 PWY-3581]
 +
** '''6''' reactions found over '''11''' reactions in the full pathway
 
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
 
* [[TYRSYN]], L-tyrosine biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=TYRSYN TYRSYN]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
 
* [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754]
 
* [[PWY-5754]], 4-hydroxybenzoate biosynthesis I (eukaryotes): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5754 PWY-5754]
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 
** '''2''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY3O-4108]], L-tyrosine degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY3O-4108 PWY3O-4108]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-7514]], L-tyrosine degradation IV (to 4-methylphenol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7514 PWY-7514]
 
* [[PWY-7514]], L-tyrosine degradation IV (to 4-methylphenol): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7514 PWY-7514]
 
** '''1''' reactions found over '''3''' reactions in the full pathway
 
** '''1''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-5048]], rosmarinic acid biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5048 PWY-5048]
+
* [[TYRFUMCAT-PWY]], L-tyrosine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=TYRFUMCAT-PWY TYRFUMCAT-PWY]
−
** '''1''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-7518]], atromentin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7518 PWY-7518]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5886]], 4-hydroxyphenylpyruvate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5886 PWY-5886]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 71: Line 71:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15093 15093]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15096 15096]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00734 R00734]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00734 R00734]
Line 94: Line 94:
 
** [http://www.uniprot.org/uniprot/P04694 P04694]
 
** [http://www.uniprot.org/uniprot/P04694 P04694]
 
{{#set: direction=REVERSIBLE}}
 
{{#set: direction=REVERSIBLE}}
−
{{#set: common name=L-phenylalanine:2-oxoglutarate aminotransferase}}
 
−
{{#set: common name=L-tyrosine:2-oxoglutarate aminotransferase}}
 
 
{{#set: ec number=EC-2.6.1.57}}
 
{{#set: ec number=EC-2.6.1.57}}
 
{{#set: ec number=EC-2.6.1.5}}
 
{{#set: ec number=EC-2.6.1.5}}
−
{{#set: gene associated=SJ05778|SJ20943|SJ07466|SJ04188|SJ07646}}
+
{{#set: common name=L-phenylalanine:2-oxoglutarate aminotransferase}}
−
{{#set: in pathway=PWY-3581|TYRFUMCAT-PWY|PWY-5886|PWY-5151|PWY-7518|TYRSYN|PWY3O-4108|PWY-5754|PWY-7514|PWY-5048}}
+
{{#set: common name=L-tyrosine:2-oxoglutarate aminotransferase}}
 +
{{#set: gene associated=SJ07466|SJ07646|SJ04188|SJ05778|SJ20943}}
 +
{{#set: in pathway=PWY-5151|PWY-5048|PWY-3581|TYRSYN|PWY-5754|PWY3O-4108|PWY-7514|TYRFUMCAT-PWY|PWY-7518|PWY-5886}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:53, 10 January 2019

Reaction TYROSINE-AMINOTRANSFERASE-RXN

  • direction:
    • REVERSIBLE
  • ec number:
  • common name:
    • L-phenylalanine:2-oxoglutarate aminotransferase
    • L-tyrosine:2-oxoglutarate aminotransferase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5151, L-tyrosine degradation II: PWY-5151
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5048, rosmarinic acid biosynthesis I: PWY-5048
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-3581, (S)-reticuline biosynthesis I: PWY-3581
    • 6 reactions found over 11 reactions in the full pathway
  • TYRSYN, L-tyrosine biosynthesis I: TYRSYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5754, 4-hydroxybenzoate biosynthesis I (eukaryotes): PWY-5754
    • 2 reactions found over 6 reactions in the full pathway
  • PWY3O-4108, L-tyrosine degradation III: PWY3O-4108
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-7514, L-tyrosine degradation IV (to 4-methylphenol): PWY-7514
    • 1 reactions found over 3 reactions in the full pathway
  • TYRFUMCAT-PWY, L-tyrosine degradation I: TYRFUMCAT-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-7518, atromentin biosynthesis: PWY-7518
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-5886, 4-hydroxyphenylpyruvate biosynthesis: PWY-5886
    • 1 reactions found over 1 reactions in the full pathway

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=TYROSINE-AMINOTRANSFERASE-RXN&oldid=17958"