Difference between revisions of "RXN-10642"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == * direction: ** REVERSIBLE * common name: ** uroporphyrinogen I decarboxyla...") |
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== Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == | == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-10642 RXN-10642] == | ||
* direction: | * direction: | ||
| − | ** | + | ** LEFT-TO-RIGHT |
| − | + | ||
| − | + | ||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37] | ** [http://enzyme.expasy.org/EC/4.1.1.37 EC-4.1.1.37] | ||
| + | * common name: | ||
| + | ** uroporphyrinogen I decarboxylase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 1 [[CPD-11444]][c] '''+''' 4 [[PROTON]][c] '''=>''' 1 [[COPROPORPHYRINOGEN_I]][c] '''+''' 4 [[CARBON-DIOXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 uroporphyrinogen-I[c] '''+''' 4 H+[c] '''=>''' 1 coproporphyrinogen I[c] '''+''' 4 CO2[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 20: | Line 20: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ09370]] | * Gene: [[SJ09370]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 33: | Line 33: | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 45: | Line 45: | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972] | ** [http://www.genome.jp/dbget-bin/www_bget?R04972 R04972] | ||
| − | {{#set: direction= | + | {{#set: direction=LEFT-TO-RIGHT}} |
| − | + | ||
{{#set: ec number=EC-4.1.1.37}} | {{#set: ec number=EC-4.1.1.37}} | ||
| + | {{#set: common name=uroporphyrinogen I decarboxylase}} | ||
{{#set: gene associated=SJ09367|SJ09370|SJ03594}} | {{#set: gene associated=SJ09367|SJ09370|SJ03594}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
Latest revision as of 13:58, 10 January 2019
Contents
Reaction RXN-10642
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- uroporphyrinogen I decarboxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-11444[c] + 4 PROTON[c] => 1 COPROPORPHYRINOGEN_I[c] + 4 CARBON-DIOXIDE[c]
- With common name(s):
- 1 uroporphyrinogen-I[c] + 4 H+[c] => 1 coproporphyrinogen I[c] + 4 CO2[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ09367
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09370
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03594
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
