Difference between revisions of "GLUTAMIN-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMIN-RXN GLUTAMIN-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** glutaminase ** aspara...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** glutaminase
 
−
** asparagine synthase (glutamine-hydrolyzing)
 
−
** imidazoleglycerol-phosphate synthase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
 
** [http://enzyme.expasy.org/EC/3.5.1.38 EC-3.5.1.38]
 
** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
 
** [http://enzyme.expasy.org/EC/3.5.1.2 EC-3.5.1.2]
 +
* common name:
 +
** glutaminase
 +
** imidazoleglycerol-phosphate synthase
 +
** asparagine synthase (glutamine-hydrolyzing)
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[WATER]][c] '''+''' 1 [[GLN]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[AMMONIUM]][c]
+
** 1 [[GLN]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[GLT]][c] '''+''' 1 [[AMMONIUM]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H2O[c] '''+''' 1 L-glutamine[c] '''=>''' 1 L-glutamate[c] '''+''' 1 ammonium[c]
+
** 1 L-glutamine[c] '''+''' 1 H2O[c] '''=>''' 1 L-glutamate[c] '''+''' 1 ammonium[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ13939]]
+
* Gene: [[SJ22095]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ04922]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ10267]]
+
* Gene: [[SJ22386]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ04921]]
+
* Gene: [[SJ20196]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
−
* Gene: [[SJ17851]]
+
* Gene: [[SJ08788]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ07094]]
−
* Gene: [[SJ13463]]
+
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ22386]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ19186]]
 
* Gene: [[SJ19186]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ12953]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 51: Line 47:
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ15949]]
+
* Gene: [[SJ10813]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ10813]]
+
* Gene: [[SJ04921]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ09511]]
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ19163]]
 
* Gene: [[SJ19163]]
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
* Gene: [[SJ22095]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
−
* Gene: [[SJ13618]]
 
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
Line 72: Line 59:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ07094]]
+
* Gene: [[SJ10267]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ07729]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ13639]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ08788]]
+
* Gene: [[SJ04922]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ12953]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ13939]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ13639]]
+
* Gene: [[SJ13618]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: GO-TERM
+
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ15949]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ13463]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ12700]]
+
* Gene: [[SJ09511]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ17851]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ20196]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ07729]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ12700]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 
== Pathways  ==
 
== Pathways  ==
 +
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 +
** '''7''' reactions found over '''8''' reactions in the full pathway
 
* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
 
* [[GLUTAMINDEG-PWY]], L-glutamine degradation I: [http://metacyc.org/META/NEW-IMAGE?object=GLUTAMINDEG-PWY GLUTAMINDEG-PWY]
 
** '''1''' reactions found over '''1''' reactions in the full pathway
 
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[CITRULBIO-PWY]], L-citrulline biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=CITRULBIO-PWY CITRULBIO-PWY]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 109: Line 109:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15889 15889]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=15890 15890]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
 
** [http://www.genome.jp/dbget-bin/www_bget?R00256 R00256]
Line 116: Line 116:
 
** [http://www.uniprot.org/uniprot/P28492 P28492]
 
** [http://www.uniprot.org/uniprot/P28492 P28492]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=glutaminase}}
 
−
{{#set: common name=asparagine synthase (glutamine-hydrolyzing)}}
 
−
{{#set: common name=imidazoleglycerol-phosphate synthase}}
 
 
{{#set: ec number=EC-3.5.1.38}}
 
{{#set: ec number=EC-3.5.1.38}}
 
{{#set: ec number=EC-3.5.1.2}}
 
{{#set: ec number=EC-3.5.1.2}}
−
{{#set: gene associated=SJ13939|SJ04922|SJ10267|SJ04921|SJ17851|SJ13463|SJ22386|SJ19186|SJ10812|SJ15949|SJ10813|SJ09511|SJ19163|SJ22095|SJ13618|SJ20190|SJ07094|SJ07729|SJ08788|SJ12953|SJ13639|SJ12700|SJ20196}}
+
{{#set: common name=glutaminase}}
−
{{#set: in pathway=GLUTAMINDEG-PWY|CITRULBIO-PWY}}
+
{{#set: common name=imidazoleglycerol-phosphate synthase}}
 +
{{#set: common name=asparagine synthase (glutamine-hydrolyzing)}}
 +
{{#set: gene associated=SJ22095|SJ22386|SJ20196|SJ08788|SJ07094|SJ19186|SJ12953|SJ10812|SJ10813|SJ04921|SJ19163|SJ20190|SJ10267|SJ13639|SJ04922|SJ13939|SJ13618|SJ15949|SJ13463|SJ09511|SJ17851|SJ07729|SJ12700}}
 +
{{#set: in pathway=CITRULBIO-PWY|GLUTAMINDEG-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:02, 10 January 2019

Reaction GLUTAMIN-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • glutaminase
    • imidazoleglycerol-phosphate synthase
    • asparagine synthase (glutamine-hydrolyzing)
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 L-glutamine[c] + 1 H2O[c] => 1 L-glutamate[c] + 1 ammonium[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links






Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=GLUTAMIN-RXN&oldid=18237"