Difference between revisions of "RXN0-5063"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-5063 RXN0-5063] == * direction: ** LEFT-TO-RIGHT * common name: ** isopentenyl-adenosine tRNA...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.8.4.3 EC-2.8.4.3] | ** [http://enzyme.expasy.org/EC/2.8.4.3 EC-2.8.4.3] | ||
| + | * common name: | ||
| + | ** isopentenyl-adenosine tRNA methylthiolase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 2 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[6-Dimethylallyladenosine37-tRNAs]][c] '''+''' 1 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[Donor-H2]][c] '''=>''' 1 [[CPD-11592]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[CH33ADO]][c] '''+''' 1 [[MET]][c] '''+''' 1 [[Acceptor]][c] '''+''' 2 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 2 S-adenosyl-L-methionine[c] '''+''' 1 N6-dimethylallyladenosine37 in tRNA[c] '''+''' 1 a sulfurated [sulfur carrier][c] '''+''' 1 a reduced electron acceptor[c] '''=>''' 1 2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 an unsulfurated [sulfur carrier][c] '''+''' 1 5'-deoxyadenosine[c] '''+''' 1 L-methionine[c] '''+''' 1 an oxidized electron acceptor[c] '''+''' 2 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 31: | Line 31: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37068 37068] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.8.4.3}} | {{#set: ec number=EC-2.8.4.3}} | ||
| + | {{#set: common name=isopentenyl-adenosine tRNA methylthiolase}} | ||
{{#set: gene associated=SJ10588|SJ10587}} | {{#set: gene associated=SJ10588|SJ10587}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:05, 10 January 2019
Contents
Reaction RXN0-5063
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- isopentenyl-adenosine tRNA methylthiolase
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 S-ADENOSYLMETHIONINE[c] + 1 6-Dimethylallyladenosine37-tRNAs[c] + 1 Sulfurated-Sulfur-Acceptors[c] + 1 Donor-H2[c] => 1 CPD-11592[c] + 1 ADENOSYL-HOMO-CYS[c] + 1 Unsulfurated-Sulfur-Acceptors[c] + 1 CH33ADO[c] + 1 MET[c] + 1 Acceptor[c] + 2 PROTON[c]
- With common name(s):
- 2 S-adenosyl-L-methionine[c] + 1 N6-dimethylallyladenosine37 in tRNA[c] + 1 a sulfurated [sulfur carrier][c] + 1 a reduced electron acceptor[c] => 1 2-methylsulfanyl-N6-dimethylallyladenosine37 in tRNA[c] + 1 S-adenosyl-L-homocysteine[c] + 1 an unsulfurated [sulfur carrier][c] + 1 5'-deoxyadenosine[c] + 1 L-methionine[c] + 1 an oxidized electron acceptor[c] + 2 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10588
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ10587
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
