Difference between revisions of "6PGLUCONOLACT-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=6PGLUCONOLACT-RXN 6PGLUCONOLACT-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** 6-phosphogl...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31] | ** [http://enzyme.expasy.org/EC/3.1.1.31 EC-3.1.1.31] | ||
| + | * common name: | ||
| + | ** 6-phosphogluconolactonase | ||
* Synonym(s): | * Synonym(s): | ||
| Line 17: | Line 17: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ07027]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
* Gene: [[SJ10585]] | * Gene: [[SJ10585]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | + | ** Source: [[orthology-ectocarpus_siliculosus]] | |
| − | ** Source: [[ | + | |
| − | + | ||
== Pathways == | == Pathways == | ||
| + | * [[GLYCOLYSIS-E-D]], superpathway of glycolysis and the Entner-Doudoroff pathway: [http://metacyc.org/META/NEW-IMAGE?object=GLYCOLYSIS-E-D GLYCOLYSIS-E-D] | ||
| + | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
* [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] | * [[P122-PWY]], heterolactic fermentation: [http://metacyc.org/META/NEW-IMAGE?object=P122-PWY P122-PWY] | ||
** '''16''' reactions found over '''18''' reactions in the full pathway | ** '''16''' reactions found over '''18''' reactions in the full pathway | ||
| − | |||
| − | |||
* [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY] | * [[OXIDATIVEPENT-PWY]], pentose phosphate pathway (oxidative branch) I: [http://metacyc.org/META/NEW-IMAGE?object=OXIDATIVEPENT-PWY OXIDATIVEPENT-PWY] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| − | * [[ | + | * [[RUMP-PWY]], formaldehyde oxidation I: [http://metacyc.org/META/NEW-IMAGE?object=RUMP-PWY RUMP-PWY] |
** '''4''' reactions found over '''6''' reactions in the full pathway | ** '''4''' reactions found over '''6''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 49: | Line 49: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=12557 12557] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035] | ** [http://www.genome.jp/dbget-bin/www_bget?R02035 R02035] | ||
| Line 55: | Line 55: | ||
** [http://www.uniprot.org/uniprot/P63337 P63337] | ** [http://www.uniprot.org/uniprot/P63337 P63337] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.1.1.31}} | {{#set: ec number=EC-3.1.1.31}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=6-phosphogluconolactonase}} |
| − | {{#set: in pathway= | + | {{#set: gene associated=SJ07027|SJ10585}} |
| + | {{#set: in pathway=GLYCOLYSIS-E-D|P122-PWY|OXIDATIVEPENT-PWY|RUMP-PWY}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:11, 10 January 2019
Contents
Reaction 6PGLUCONOLACT-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 6-phosphogluconolactonase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 D-6-P-GLUCONO-DELTA-LACTONE[c] + 1 WATER[c] => 1 PROTON[c] + 1 CPD-2961[c]
- With common name(s):
- 1 6-phospho D-glucono-1,5-lactone[c] + 1 H2O[c] => 1 H+[c] + 1 D-gluconate 6-phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ07027
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10585
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- GLYCOLYSIS-E-D, superpathway of glycolysis and the Entner-Doudoroff pathway: GLYCOLYSIS-E-D
- 4 reactions found over 6 reactions in the full pathway
- P122-PWY, heterolactic fermentation: P122-PWY
- 16 reactions found over 18 reactions in the full pathway
- OXIDATIVEPENT-PWY, pentose phosphate pathway (oxidative branch) I: OXIDATIVEPENT-PWY
- 3 reactions found over 3 reactions in the full pathway
- RUMP-PWY, formaldehyde oxidation I: RUMP-PWY
- 4 reactions found over 6 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
