Difference between revisions of "SJ04443"

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(Created page with "Category:Gene == Gene SJ04443 == * right end position: ** 467977 * transcription direction: ** NEGATIVE * left end position: ** 454389 * centisome position: ** 88.94694...")
 
 
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[[Category:Gene]]
 
[[Category:Gene]]
 
== Gene SJ04443 ==
 
== Gene SJ04443 ==
−
* right end position:
 
−
** 467977
 
 
* transcription direction:
 
* transcription direction:
 
** NEGATIVE
 
** NEGATIVE
 +
* right end position:
 +
** 467977
 
* left end position:
 
* left end position:
 
** 454389
 
** 454389
Line 28: Line 28:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-nannochloropsis_salina]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
 
* Reaction: [[3-OXOACYL-ACP-SYNTH-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 48: Line 48:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[ENOYL-ACP-REDUCT-NADPH-RXN]]
 
* Reaction: [[ENOYL-ACP-REDUCT-NADPH-RXN]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 111: Line 111:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-9518]]
 
* Reaction: [[RXN-9518]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 126: Line 126:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-9524]]
 
* Reaction: [[RXN-9524]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 138: Line 138:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-9528]]
 
* Reaction: [[RXN-9528]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 150: Line 150:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-9532]]
 
* Reaction: [[RXN-9532]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 165: Line 165:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-9536]]
 
* Reaction: [[RXN-9536]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 180: Line 180:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Reaction: [[RXN-9540]]
 
* Reaction: [[RXN-9540]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 243: Line 243:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: go-term
 
*** Assignment: go-term
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways associated ==
 
== Pathways associated ==
 +
* [[PWY-5989]]
 +
* [[PWY-5971]]
 +
* [[PWY-5973]]
 +
* [[PWY-6799]]
 
* [[PWY-6113]]
 
* [[PWY-6113]]
−
* [[FASYN-ELONG-PWY]]
 
−
* [[PWY-6519]]
 
−
* [[PWY-7388]]
 
−
* [[PWY-5367]]
 
 
* [[PWY-7664]]
 
* [[PWY-7664]]
−
* [[PWY-6799]]
+
* [[FASYN-ELONG-PWY]]
−
* [[PWY-5971]]
+
* [[FASYN-INITIAL-PWY]]
 +
* [[PWY-4381]]
 
* [[PWY-6282]]
 
* [[PWY-6282]]
−
* [[PWY-5965]]
+
* [[PWY0-862]]
−
* [[PWY-5973]]
+
* [[PWY-7388]]
−
* [[PWY-5989]]
+
* [[PWY-5994]]
 
* [[PWY-5966]]
 
* [[PWY-5966]]
 +
* [[PWY-6519]]
 +
* [[PWY-5367]]
 
* [[PWYG-321]]
 
* [[PWYG-321]]
−
* [[FASYN-INITIAL-PWY]]
+
* [[PWY-7858]]
−
* [[PWY0-862]]
+
 
* [[PWY-7663]]
 
* [[PWY-7663]]
−
* [[PWY-5994]]
+
* [[PWY-5965]]
 
* [[PWY3O-355]]
 
* [[PWY3O-355]]
−
* [[PWY-4381]]
 
 
== External links  ==
 
== External links  ==
−
{{#set: right end position=467977}}
 
 
{{#set: transcription direction=NEGATIVE}}
 
{{#set: transcription direction=NEGATIVE}}
 +
{{#set: right end position=467977}}
 
{{#set: left end position=454389}}
 
{{#set: left end position=454389}}
 
{{#set: centisome position=88.94694    }}
 
{{#set: centisome position=88.94694    }}
 
{{#set: reaction associated=2.3.1.179-RXN|2.3.1.41-RXN|3-HYDROXYDECANOYL-ACP-DEHYDR-RXN|3-OXOACYL-ACP-REDUCT-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|4.2.1.58-RXN|4.2.1.59-RXN|4.2.1.61-RXN|ACP-S-ACETYLTRANSFER-RXN|ENOYL-ACP-REDUCT-NADPH-RXN|FATTY-ACID-SYNTHASE-RXN|MALONYL-COA-ACP-TRANSACYL-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-13008|RXN-16615|RXN-16621|RXN-16625|RXN-16629|RXN-8391|RXN-9514|RXN-9515|RXN-9516|RXN-9518|RXN-9520|RXN-9521|RXN-9523|RXN-9524|RXN-9526|RXN-9527|RXN-9528|RXN-9530|RXN-9531|RXN-9532|RXN-9533|RXN-9534|RXN-9535|RXN-9536|RXN-9537|RXN-9538|RXN-9539|RXN-9540|RXN-9542|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN-9655|RXN0-2141|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN3O-1803}}
 
{{#set: reaction associated=2.3.1.179-RXN|2.3.1.41-RXN|3-HYDROXYDECANOYL-ACP-DEHYDR-RXN|3-OXOACYL-ACP-REDUCT-RXN|3-OXOACYL-ACP-SYNTH-BASE-RXN|3-OXOACYL-ACP-SYNTH-RXN|4.2.1.58-RXN|4.2.1.59-RXN|4.2.1.61-RXN|ACP-S-ACETYLTRANSFER-RXN|ENOYL-ACP-REDUCT-NADPH-RXN|FATTY-ACID-SYNTHASE-RXN|MALONYL-COA-ACP-TRANSACYL-RXN|RXN-10059|RXN-10654|RXN-10658|RXN-11474|RXN-11479|RXN-13008|RXN-16615|RXN-16621|RXN-16625|RXN-16629|RXN-8391|RXN-9514|RXN-9515|RXN-9516|RXN-9518|RXN-9520|RXN-9521|RXN-9523|RXN-9524|RXN-9526|RXN-9527|RXN-9528|RXN-9530|RXN-9531|RXN-9532|RXN-9533|RXN-9534|RXN-9535|RXN-9536|RXN-9537|RXN-9538|RXN-9539|RXN-9540|RXN-9542|RXN-9632|RXN-9648|RXN-9650|RXN-9651|RXN-9652|RXN-9653|RXN-9654|RXN-9655|RXN0-2141|RXN1G-368|RXN1G-445|RXN1G-460|RXN1G-499|RXN3O-1803}}
−
{{#set: pathway associated=PWY-6113|FASYN-ELONG-PWY|PWY-6519|PWY-7388|PWY-5367|PWY-7664|PWY-6799|PWY-5971|PWY-6282|PWY-5965|PWY-5973|PWY-5989|PWY-5966|PWYG-321|FASYN-INITIAL-PWY|PWY0-862|PWY-7663|PWY-5994|PWY3O-355|PWY-4381}}
+
{{#set: pathway associated=PWY-5989|PWY-5971|PWY-5973|PWY-6799|PWY-6113|PWY-7664|FASYN-ELONG-PWY|FASYN-INITIAL-PWY|PWY-4381|PWY-6282|PWY0-862|PWY-7388|PWY-5994|PWY-5966|PWY-6519|PWY-5367|PWYG-321|PWY-7858|PWY-7663|PWY-5965|PWY3O-355}}

Latest revision as of 13:33, 10 January 2019

Gene SJ04443

  • transcription direction:
    • NEGATIVE
  • right end position:
    • 467977
  • left end position:
    • 454389
  • centisome position:
    • 88.94694
  • Synonym(s):

Reactions associated

Pathways associated

External links

Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=SJ04443&oldid=19216"