Difference between revisions of "FORMYLTHFDEFORMYL-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=FORMYLTHFDEFORMYL-RXN FORMYLTHFDEFORMYL-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** for...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.5.1.10 EC-3.5.1.10] | ** [http://enzyme.expasy.org/EC/3.5.1.10 EC-3.5.1.10] | ||
| + | * common name: | ||
| + | ** formyltetrahydrofolate deformylase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[ | + | ** 1 [[FORMYL-THF-GLU-N]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[THF-GLU-N]][c] '''+''' 1 [[FORMATE]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 H2O[c] '''=>''' 1 | + | ** 1 an N10-formyl-tetrahydrofolate[c] '''+''' 1 H2O[c] '''=>''' 1 a tetrahydrofolate[c] '''+''' 1 formate[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 21: | Line 21: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
| + | * [[PWY-5497]], purine nucleobases degradation II (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5497 PWY-5497] | ||
| + | ** '''10''' reactions found over '''24''' reactions in the full pathway | ||
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] | * [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY] | ||
** '''6''' reactions found over '''17''' reactions in the full pathway | ** '''6''' reactions found over '''17''' reactions in the full pathway | ||
| + | * [[PWY-7909]], formaldehyde oxidation VII (THF pathway): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7909 PWY-7909] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201] | * [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201] | ||
| − | ** ''' | + | ** '''9''' reactions found over '''12''' reactions in the full pathway |
| − | + | ||
| − | + | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 33: | Line 35: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=19834 19834] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944] | ** [http://www.genome.jp/dbget-bin/www_bget?R00944 R00944] | ||
| Line 43: | Line 45: | ||
** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7] | ** [http://www.uniprot.org/uniprot/Q9X7F7 Q9X7F7] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.5.1.10}} | {{#set: ec number=EC-3.5.1.10}} | ||
| + | {{#set: common name=formyltetrahydrofolate deformylase}} | ||
{{#set: gene associated=SJ15379}} | {{#set: gene associated=SJ15379}} | ||
| − | {{#set: in pathway=P164-PWY|PWY- | + | {{#set: in pathway=PWY-5497|P164-PWY|PWY-7909|PWY-2201}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 11:50, 10 January 2019
Contents
Reaction FORMYLTHFDEFORMYL-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- formyltetrahydrofolate deformylase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 FORMYL-THF-GLU-N[c] + 1 WATER[c] => 1 THF-GLU-N[c] + 1 FORMATE[c] + 1 PROTON[c]
- With common name(s):
- 1 an N10-formyl-tetrahydrofolate[c] + 1 H2O[c] => 1 a tetrahydrofolate[c] + 1 formate[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ15379
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-5497, purine nucleobases degradation II (anaerobic): PWY-5497
- 10 reactions found over 24 reactions in the full pathway
- P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
- 6 reactions found over 17 reactions in the full pathway
- PWY-7909, formaldehyde oxidation VII (THF pathway): PWY-7909
- 3 reactions found over 4 reactions in the full pathway
- PWY-2201, folate transformations I: PWY-2201
- 9 reactions found over 12 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
