Difference between revisions of "RXN-12440"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12440 RXN-12440] == * direction: ** LEFT-TO-RIGHT * common name: ** L-ascorbate peroxidase * ec...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** L-ascorbate peroxidase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.11.1.11 EC-1.11.1.11]
 
** [http://enzyme.expasy.org/EC/1.11.1.11 EC-1.11.1.11]
 +
* common name:
 +
** L-ascorbate peroxidase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 2 [[ASCORBATE]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''=>''' 2 [[WATER]][c] '''+''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c]
+
** 2 [[ASCORBATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[ASCORBATE]][c] '''+''' 1 [[L-DEHYDRO-ASCORBATE]][c] '''+''' 2 [[WATER]][c]
 
* With common name(s):
 
* With common name(s):
−
** 2 L-ascorbate[c] '''+''' 1 H+[c] '''+''' 1 hydrogen peroxide[c] '''=>''' 2 H2O[c] '''+''' 1 L-ascorbate[c] '''+''' 1 L-dehydro-ascorbate[c]
+
** 2 L-ascorbate[c] '''+''' 1 hydrogen peroxide[c] '''+''' 1 H+[c] '''=>''' 1 L-ascorbate[c] '''+''' 1 L-dehydro-ascorbate[c] '''+''' 2 H2O[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ14435]]
+
* Gene: [[SJ17253]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
* Gene: [[SJ14435]]
−
* Gene: [[SJ16420]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
* Gene: [[SJ17253]]
+
* Gene: [[SJ04585]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ04585]]
+
* Gene: [[SJ16420]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959]
 
* [[PWY-6959]], L-ascorbate degradation V: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6959 PWY-6959]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''1''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-6960]], L-ascorbate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6960 PWY-6960]
+
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
 
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961]
 
* [[PWY-6961]], L-ascorbate degradation II (bacterial, aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6961 PWY-6961]
−
** '''3''' reactions found over '''8''' reactions in the full pathway
+
** '''1''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6960]], L-ascorbate degradation III: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6960 PWY-6960]
 +
** '''1''' reactions found over '''6''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
Line 46: Line 46:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22997 22997]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=L-ascorbate peroxidase}}
 
 
{{#set: ec number=EC-1.11.1.11}}
 
{{#set: ec number=EC-1.11.1.11}}
−
{{#set: gene associated=SJ14435|SJ16420|SJ17253|SJ04585}}
+
{{#set: common name=L-ascorbate peroxidase}}
−
{{#set: in pathway=PWY-6959|PWY-6960|PWY-6961}}
+
{{#set: gene associated=SJ17253|SJ14435|SJ04585|SJ16420}}
 +
{{#set: in pathway=PWY-6959|PWY-6961|PWY-6960}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 14:40, 10 January 2019

Reaction RXN-12440

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • L-ascorbate peroxidase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6959, L-ascorbate degradation V: PWY-6959
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-6961, L-ascorbate degradation II (bacterial, aerobic): PWY-6961
    • 1 reactions found over 8 reactions in the full pathway
  • PWY-6960, L-ascorbate degradation III: PWY-6960
    • 1 reactions found over 6 reactions in the full pathway

Reconstruction information

External links





Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-12440&oldid=19448"