Difference between revisions of "RXN-9532"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-9532 RXN-9532] == * direction: ** LEFT-TO-RIGHT * common name: ** 3-oxo-dodecanoyl-[acyl-carrie...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 3-oxo-dodecanoyl-[acyl-carrier protein] reductase
 
−
** fatty acid synthase
 
−
** (R)-3-hydroxydodecanoyl-[acp] reductase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.86 EC-2.3.1.86]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/2.3.1.85 EC-2.3.1.85]
 
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 
** [http://enzyme.expasy.org/EC/1.1.1.100 EC-1.1.1.100]
 +
* common name:
 +
** 3-oxo-dodecanoyl-[acyl-carrier protein] reductase
 +
** fatty acid synthase
 +
** (R)-3-hydroxydodecanoyl-[acp] reductase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[PROTON]][c] '''+''' 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''=>''' 1 [[R-3-hydroxydodecanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
+
** 1 [[3-oxo-dodecanoyl-ACPs]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[R-3-hydroxydodecanoyl-ACPs]][c] '''+''' 1 [[NADP]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 H+[c] '''+''' 1 a 3-oxo-dodecanoyl-[acp][c] '''+''' 1 NADPH[c] '''=>''' 1 a (3R)-3-hydroxydodecanoyl-[acp][c] '''+''' 1 NADP+[c]
+
** 1 a 3-oxo-dodecanoyl-[acp][c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''=>''' 1 a (3R)-3-hydroxydodecanoyl-[acp][c] '''+''' 1 NADP+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ13014]]
+
* Gene: [[SJ11672]]
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
−
* Gene: [[SJ19629]]
+
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: GO-TERM
+
−
* Gene: [[SJ04229]]
+
−
** Source: [[annotation-saccharina_japonica_genome]]
+
−
*** Assignment: EC-NUMBER
+
−
* Gene: [[SJ03883]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 40: Line 30:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00320]]
+
* Gene: [[SJ04769]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06944]]
+
* Gene: [[SJ00613]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
Line 49: Line 39:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04769]]
+
* Gene: [[SJ06616]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06616]]
+
* Gene: [[SJ06617]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ04443]]
+
* Gene: [[SJ19629]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ00613]]
+
* Gene: [[SJ04229]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ03883]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ10624]]
+
* Gene: [[SJ06944]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ06617]]
+
* Gene: [[SJ00320]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ11672]]
+
* Gene: [[SJ04443]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
 +
* Gene: [[SJ10624]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ13014]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
 
* [[PWY-5971]], palmitate biosynthesis II (bacteria and plants): [http://metacyc.org/META/NEW-IMAGE?object=PWY-5971 PWY-5971]
Line 84: Line 84:
 
== External links  ==
 
== External links  ==
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=3-oxo-dodecanoyl-[acyl-carrier protein] reductase}}
 
−
{{#set: common name=fatty acid synthase}}
 
−
{{#set: common name=(R)-3-hydroxydodecanoyl-[acp] reductase}}
 
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.86}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-2.3.1.85}}
 
{{#set: ec number=EC-1.1.1.100}}
 
{{#set: ec number=EC-1.1.1.100}}
−
{{#set: gene associated=SJ13014|SJ19629|SJ04229|SJ03883|SJ15983|SJ17743|SJ00320|SJ06944|SJ18059|SJ04769|SJ06616|SJ04443|SJ00613|SJ10624|SJ06617|SJ11672}}
+
{{#set: common name=3-oxo-dodecanoyl-[acyl-carrier protein] reductase}}
 +
{{#set: common name=fatty acid synthase}}
 +
{{#set: common name=(R)-3-hydroxydodecanoyl-[acp] reductase}}
 +
{{#set: gene associated=SJ11672|SJ15983|SJ17743|SJ04769|SJ00613|SJ18059|SJ06616|SJ06617|SJ19629|SJ04229|SJ03883|SJ06944|SJ00320|SJ04443|SJ10624|SJ13014}}
 
{{#set: in pathway=PWY-5971|PWY-5994}}
 
{{#set: in pathway=PWY-5971|PWY-5994}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 10:52, 10 January 2019

Reaction RXN-9532

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 3-oxo-dodecanoyl-[acyl-carrier protein] reductase
    • fatty acid synthase
    • (R)-3-hydroxydodecanoyl-[acp] reductase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-5971, palmitate biosynthesis II (bacteria and plants): PWY-5971
    • 31 reactions found over 31 reactions in the full pathway
  • PWY-5994, palmitate biosynthesis I (animals and fungi): PWY-5994
    • 31 reactions found over 31 reactions in the full pathway

Reconstruction information

External links

"3-oxo-dodecanoyl-[acyl-carrier protein] reductase" cannot be used as a page name in this wiki.
"(R)-3-hydroxydodecanoyl-[acp] reductase" cannot be used as a page name in this wiki.



Retrieved from "http://gem-aureme.irisa.fr/sjapgem/index.php?title=RXN-9532&oldid=14122"