Difference between revisions of "NARINGENIN-CHALCONE-SYNTHASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=NARINGENIN-CHALCONE-SYNTHASE-RXN NARINGENIN-CHALCONE-SYNTHASE-RXN] == * direction: ** LEFT-TO-RIGHT...")
 
 
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* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** naringenin-chalcone synthase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/2.3.1.74 EC-2.3.1.74]
 
** [http://enzyme.expasy.org/EC/2.3.1.74 EC-2.3.1.74]
 +
* common name:
 +
** naringenin-chalcone synthase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 3 [[MALONYL-COA]][c] '''+''' 3 [[PROTON]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''=>''' 1 [[APIGENIN]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c]
+
** 3 [[PROTON]][c] '''+''' 1 [[P-COUMAROYL-COA]][c] '''+''' 3 [[MALONYL-COA]][c] '''=>''' 1 [[CPD-20012]][c] '''+''' 3 [[CARBON-DIOXIDE]][c] '''+''' 4 [[CO-A]][c]
 
* With common name(s):
 
* With common name(s):
−
** 3 malonyl-CoA[c] '''+''' 3 H+[c] '''+''' 1 4-coumaroyl-CoA[c] '''=>''' 1 2',4,4',6'-tetrahydroxychalcone[c] '''+''' 3 CO2[c] '''+''' 4 coenzyme A[c]
+
** 3 H+[c] '''+''' 1 4-coumaroyl-CoA[c] '''+''' 3 malonyl-CoA[c] '''=>''' 1 naringenin chalcone[c] '''+''' 3 CO2[c] '''+''' 4 coenzyme A[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
 +
* Gene: [[SJ20077]]
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ18059]]
 
* Gene: [[SJ18059]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
** Source: [[orthology-arabidopsis_thaliana]]
 
** Source: [[orthology-arabidopsis_thaliana]]
−
* Gene: [[SJ20077]]
 
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
 
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-6316]], aromatic polyketides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6316 PWY-6316]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-5135]], xanthohumol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
 
* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
 
* [[PWY-7397]], naringenin biosynthesis (engineered): [http://metacyc.org/META/NEW-IMAGE?object=PWY-7397 PWY-7397]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY1F-FLAVSYN]], flavonoid biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY1F-FLAVSYN PWY1F-FLAVSYN]
 +
** '''5''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-5135]], xanthohumol biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5135 PWY-5135]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY-6316]], aromatic polyketides biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-6316 PWY-6316]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 
* [[PWY-6787]], flavonoid biosynthesis (in equisetum): [http://metacyc.org/META/NEW-IMAGE?object=PWY-6787 PWY-6787]
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-7897]], flavonoid di-C-glucosylation: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7897 PWY-7897]
 +
** '''3''' reactions found over '''15''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11128 11128]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=11129 11129]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01613 R01613]
 
** [http://www.genome.jp/dbget-bin/www_bget?R01613 R01613]
Line 114: Line 116:
 
** [http://www.uniprot.org/uniprot/Q41292 Q41292]
 
** [http://www.uniprot.org/uniprot/Q41292 Q41292]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=naringenin-chalcone synthase}}
 
 
{{#set: ec number=EC-2.3.1.74}}
 
{{#set: ec number=EC-2.3.1.74}}
−
{{#set: gene associated=SJ18059|SJ20077}}
+
{{#set: common name=naringenin-chalcone synthase}}
−
{{#set: in pathway=PWY-6316|PWY-5135|PWY1F-FLAVSYN|PWY-7397|PWY-6787}}
+
{{#set: gene associated=SJ20077|SJ18059}}
 +
{{#set: in pathway=PWY-7397|PWY1F-FLAVSYN|PWY-5135|PWY-6316|PWY-6787|PWY-7897}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 13:52, 10 January 2019

Reaction NARINGENIN-CHALCONE-SYNTHASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • naringenin-chalcone synthase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-7397, naringenin biosynthesis (engineered): PWY-7397
    • 3 reactions found over 4 reactions in the full pathway
  • PWY1F-FLAVSYN, flavonoid biosynthesis: PWY1F-FLAVSYN
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5135, xanthohumol biosynthesis: PWY-5135
    • 2 reactions found over 4 reactions in the full pathway
  • PWY-6316, aromatic polyketides biosynthesis: PWY-6316
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6787, flavonoid biosynthesis (in equisetum): PWY-6787
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-7897, flavonoid di-C-glucosylation: PWY-7897
    • 3 reactions found over 15 reactions in the full pathway

Reconstruction information

External links





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