Difference between revisions of "RXN-5464"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5464 RXN-5464] == * direction: ** LEFT-TO-RIGHT * common name: ** DP-Man:Man3GlcNAc2-PP-dolicho...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131] | ** [http://enzyme.expasy.org/EC/2.4.1.131 EC-2.4.1.131] | ||
| + | * common name: | ||
| + | ** DP-Man:Man3GlcNAc2-PP-dolichol α-1,2-mannosyltransferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 2 [[GDP-MANNOSE]][c] '''+''' 1 [[CPD-5162]][c] '''=>''' 1 [[CPD-5164]][c] '''+''' 2 [[GDP]][c] '''+''' 2 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol | + | ** 2 GDP-α-D-mannose[c] '''+''' 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''=>''' 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] '''+''' 2 GDP[c] '''+''' 2 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
* Gene: [[SJ11238]] | * Gene: [[SJ11238]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[SJ05950]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation (eukaryotic | + | * [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]], protein N-glycosylation initial phase (eukaryotic): [http://metacyc.org/META/NEW-IMAGE?object=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS] |
| − | ** ''' | + | ** '''16''' reactions found over '''19''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 34: | Line 34: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=29524 29524] |
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.4.1.131}} | {{#set: ec number=EC-2.4.1.131}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=DP-Man:Man3GlcNAc2-PP-dolichol α-1,2-mannosyltransferase}} |
| + | {{#set: gene associated=SJ11238|SJ05950}} | ||
{{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}} | {{#set: in pathway=MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 13:59, 10 January 2019
Contents
Reaction RXN-5464
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- DP-Man:Man3GlcNAc2-PP-dolichol α-1,2-mannosyltransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 GDP-MANNOSE[c] + 1 CPD-5162[c] => 1 CPD-5164[c] + 2 GDP[c] + 2 PROTON[c]
- With common name(s):
- 2 GDP-α-D-mannose[c] + 1 α-D-Man-(1→3)-[α-D-Man-(1→6)]-α-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] => 1 α-D-Man-(1→2)-α-D-Man-(1→2)-α-D-Man-(1→3)-[α-D-Man-(1→6)]-β-D-Man-(1→4)-β-D-GlcNAc-(1→4)-α-D-GlcNAc-diphosphodolichol[c] + 2 GDP[c] + 2 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ11238
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ05950
- Source: orthology-ectocarpus_siliculosus
Pathways
- MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS, protein N-glycosylation initial phase (eukaryotic): MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS
- 16 reactions found over 19 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
