Difference between revisions of "TRNA-URACIL-5--METHYLTRANSFERASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=TRNA-URACIL-5--METHYLTRANSFERASE-RXN TRNA-URACIL-5--METHYLTRANSFERASE-RXN] == * direction: ** LEFT-...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.1.1.35 EC-2.1.1.35] | ** [http://enzyme.expasy.org/EC/2.1.1.35 EC-2.1.1.35] | ||
| + | * common name: | ||
| + | ** tRNA(m5U54)methyltransferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[S-ADENOSYLMETHIONINE]][c] '''+''' 1 [[Uracil-54-in-tRNA]][c] '''=>''' 1 [[tRNA-containing-5Me-uridine54]][c] '''+''' 1 [[ADENOSYL-HOMO-CYS]][c] '''+''' 1 [[PROTON]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 S-adenosyl-L-methionine[c] '''+''' 1 a uracil54 in tRNA[c] '''=>''' 1 a 5-methyluracil54 in tRNA[c] '''+''' 1 S-adenosyl-L-homocysteine[c] '''+''' 1 H+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 30: | Line 30: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=42713 42713] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594] | ** [http://www.genome.jp/dbget-bin/www_bget?R00594 R00594] | ||
| Line 38: | Line 40: | ||
** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82] | ** [http://www.uniprot.org/uniprot/Q9JT82 Q9JT82] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.1.1.35}} | {{#set: ec number=EC-2.1.1.35}} | ||
| + | {{#set: common name=tRNA(m5U54)methyltransferase}} | ||
{{#set: gene associated=SJ03220}} | {{#set: gene associated=SJ03220}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 14:20, 10 January 2019
Contents
Reaction TRNA-URACIL-5--METHYLTRANSFERASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- tRNA(m5U54)methyltransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 S-ADENOSYLMETHIONINE[c] + 1 Uracil-54-in-tRNA[c] => 1 tRNA-containing-5Me-uridine54[c] + 1 ADENOSYL-HOMO-CYS[c] + 1 PROTON[c]
- With common name(s):
- 1 S-adenosyl-L-methionine[c] + 1 a uracil54 in tRNA[c] => 1 a 5-methyluracil54 in tRNA[c] + 1 S-adenosyl-L-homocysteine[c] + 1 H+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ03220
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
