Difference between revisions of "PGPPHOSPHA-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=PGPPHOSPHA-RXN PGPPHOSPHA-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** phosphatidylglyce...") |
|||
| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.1.3.27 EC-3.1.3.27] | ** [http://enzyme.expasy.org/EC/3.1.3.27 EC-3.1.3.27] | ||
| + | * common name: | ||
| + | ** phosphatidylglycerophosphatase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[L-1-PHOSPHATIDYL-GLYCEROL-P]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[L-1-PHOSPHATIDYL-GLYCEROL]][c] '''+''' 1 [[Pi]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c] '''+''' 1 H2O[c] '''=>''' 1 an L-1-phosphatidyl-sn-glycerol[c] '''+''' 1 phosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 24: | Line 24: | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
== Pathways == | == Pathways == | ||
| − | * [[ | + | * [[PWY0-1545]], cardiolipin biosynthesis III: [http://metacyc.org/META/NEW-IMAGE?object=PWY0-1545 PWY0-1545] |
| − | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
* [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8] | * [[PWY4FS-8]], phosphatidylglycerol biosynthesis II (non-plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-8 PWY4FS-8] | ||
| + | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY4FS-7]], phosphatidylglycerol biosynthesis I (plastidic): [http://metacyc.org/META/NEW-IMAGE?object=PWY4FS-7 PWY4FS-7] | ||
** '''3''' reactions found over '''4''' reactions in the full pathway | ** '''3''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269] | * [[PWY-5269]], cardiolipin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5269 PWY-5269] | ||
| Line 34: | Line 36: | ||
* [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668] | * [[PWY-5668]], cardiolipin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5668 PWY-5668] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| − | |||
| − | |||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 51: | Line 51: | ||
** [http://www.uniprot.org/uniprot/P0A924 P0A924] | ** [http://www.uniprot.org/uniprot/P0A924 P0A924] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.1.3.27}} | {{#set: ec number=EC-3.1.3.27}} | ||
| + | {{#set: common name=phosphatidylglycerophosphatase}} | ||
{{#set: gene associated=SJ19931|SJ14627}} | {{#set: gene associated=SJ19931|SJ14627}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=PWY0-1545|PWY4FS-8|PWY4FS-7|PWY-5269|PWY-7817|PWY-5668}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 15:26, 10 January 2019
Contents
Reaction PGPPHOSPHA-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- phosphatidylglycerophosphatase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 L-1-PHOSPHATIDYL-GLYCEROL-P[c] + 1 WATER[c] => 1 L-1-PHOSPHATIDYL-GLYCEROL[c] + 1 Pi[c]
- With common name(s):
- 1 1-(3-sn-phosphatidyl)-sn-glycerol 3-phosphate[c] + 1 H2O[c] => 1 an L-1-phosphatidyl-sn-glycerol[c] + 1 phosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ19931
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14627
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY0-1545, cardiolipin biosynthesis III: PWY0-1545
- 2 reactions found over 3 reactions in the full pathway
- PWY4FS-8, phosphatidylglycerol biosynthesis II (non-plastidic): PWY4FS-8
- 3 reactions found over 4 reactions in the full pathway
- PWY4FS-7, phosphatidylglycerol biosynthesis I (plastidic): PWY4FS-7
- 3 reactions found over 4 reactions in the full pathway
- PWY-5269, cardiolipin biosynthesis II: PWY-5269
- 3 reactions found over 3 reactions in the full pathway
- PWY-7817, type I lipoteichoic acid biosynthesis (S. aureus): PWY-7817
- 6 reactions found over 16 reactions in the full pathway
- PWY-5668, cardiolipin biosynthesis I: PWY-5668
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
