Difference between revisions of "RXN-17918"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17918 RXN-17918] == * direction: ** LEFT-TO-RIGHT * common name: ** DNA ligase (ATP) * Synonym(...")
 
 
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== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
** 2 [[PROTON]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''=>''' 1 [[DNA-Ligase-L-lysine]][c] '''+''' 1 [[A-5-prime-PP-5-prime-DNA]][c]
+
** 1 [[DNA-Ligase-L-lysine-adenylate]][c] '''+''' 1 [[5-Phospho-terminated-DNAs]][c] '''+''' 2 [[PROTON]][c] '''=>''' 1 [[A-5-prime-PP-5-prime-DNA]][c] '''+''' 1 [[DNA-Ligase-L-lysine]][c]
 
* With common name(s):
 
* With common name(s):
** 2 H+[c] '''+''' 1 a 5'-phospho-[DNA][c] '''+''' 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''=>''' 1 a [DNA ligase]-L-lysine[c] '''+''' 1 a 5'-(5'-diphosphoadenosine)-[DNA][c]
+
** 1 a [DNA ligase]-N6-(5'-adenylyl)-L-lysine[c] '''+''' 1 a 5'-phospho-[DNA][c] '''+''' 2 H+[c] '''=>''' 1 an adenosine-5'-diphospho-5'-[DNA][c] '''+''' 1 a [DNA ligase]-L-lysine[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
* Gene: [[SJ16080]]
+
* Gene: [[SJ15543]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
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** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
* Gene: [[SJ15543]]
+
* Gene: [[SJ19344]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
* Gene: [[SJ19344]]
+
* Gene: [[SJ16080]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
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{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: common name=DNA ligase (ATP)}}
 
{{#set: common name=DNA ligase (ATP)}}
{{#set: gene associated=SJ16080|SJ13521|SJ15543|SJ19344}}
+
{{#set: gene associated=SJ15543|SJ13521|SJ19344|SJ16080}}
 
{{#set: in pathway=}}
 
{{#set: in pathway=}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 14:27, 10 January 2019

Reaction RXN-17918

  • direction:
    • LEFT-TO-RIGHT
  • common name:
    • DNA ligase (ATP)
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

Reconstruction information

External links