Difference between revisions of "RXN66-281"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN66-281 RXN66-281] == * direction: ** LEFT-TO-RIGHT * common name: ** squalene synthase ** presqu...") |
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| Line 5: | Line 5: | ||
* common name: | * common name: | ||
** squalene synthase | ** squalene synthase | ||
| − | |||
** farnesyl-diphosphate farnesyltransferase | ** farnesyl-diphosphate farnesyltransferase | ||
| + | ** presqualene diphosphate:farnesyl-diphosphate farnesyltransferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[CPD-465]][c] '''+''' 1 [[NADH-P-OR-NOP]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[PPI]][c] '''+''' 1 [[SQUALENE]][c] '''+''' 1 [[NAD-P-OR-NOP]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 presqualene diphosphate[c] '''+''' 1 NAD(P)H[c] '''+''' 1 H+[c] '''=>''' 1 diphosphate[c] '''+''' 1 squalene[c] '''+''' 1 NAD(P)+[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ02885]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: GO-TERM | ||
* Gene: [[SJ13532]] | * Gene: [[SJ13532]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
| − | |||
== Pathways == | == Pathways == | ||
== Reconstruction information == | == Reconstruction information == | ||
| Line 37: | Line 37: | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
{{#set: common name=squalene synthase}} | {{#set: common name=squalene synthase}} | ||
| − | |||
{{#set: common name=farnesyl-diphosphate farnesyltransferase}} | {{#set: common name=farnesyl-diphosphate farnesyltransferase}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=presqualene diphosphate:farnesyl-diphosphate farnesyltransferase}} |
| + | {{#set: gene associated=SJ02885|SJ13532}} | ||
{{#set: in pathway=}} | {{#set: in pathway=}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 14:39, 10 January 2019
Contents
Reaction RXN66-281
- direction:
- LEFT-TO-RIGHT
- common name:
- squalene synthase
- farnesyl-diphosphate farnesyltransferase
- presqualene diphosphate:farnesyl-diphosphate farnesyltransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 CPD-465[c] + 1 NADH-P-OR-NOP[c] + 1 PROTON[c] => 1 PPI[c] + 1 SQUALENE[c] + 1 NAD-P-OR-NOP[c]
- With common name(s):
- 1 presqualene diphosphate[c] + 1 NAD(P)H[c] + 1 H+[c] => 1 diphosphate[c] + 1 squalene[c] + 1 NAD(P)+[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ02885
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ13532
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
