Difference between revisions of "RXN0-949"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN0-949 RXN0-949] == * direction: ** LEFT-TO-RIGHT * common name: ** lipoyl synthase * ec number:...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8] | ** [http://enzyme.expasy.org/EC/2.8.1.8 EC-2.8.1.8] | ||
| + | * common name: | ||
| + | ** lipoyl synthase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 1 [[Octanoylated-domains]][c] '''+''' 2 [[Sulfurated-Sulfur-Acceptors]][c] '''+''' 2 [[Reduced-2Fe-2S-Ferredoxins]][c] '''+''' 2 [[S-ADENOSYLMETHIONINE]][c] '''=>''' 2 [[MET]][c] '''+''' 2 [[Unsulfurated-Sulfur-Acceptors]][c] '''+''' 1 [[Lipoyl-Protein-N6-lipoyllysine]][c] '''+''' 2 [[CH33ADO]][c] '''+''' 2 [[Oxidized-2Fe-2S-Ferredoxins]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] '''+''' 2 a sulfurated [sulfur carrier][c] '''+''' 2 a reduced [2Fe-2S] ferredoxin[c] '''+''' 2 S-adenosyl-L-methionine[c] '''=>''' 2 L-methionine[c] '''+''' 2 an unsulfurated [sulfur carrier][c] '''+''' 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] '''+''' 2 5'-deoxyadenosine[c] '''+''' 2 an oxidized [2Fe-2S] ferredoxin[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
| − | |||
* Gene: [[SJ03663]] | * Gene: [[SJ03663]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
* Gene: [[SJ04393]] | * Gene: [[SJ04393]] | ||
| + | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| + | *** Assignment: EC-NUMBER | ||
| + | * Gene: [[SJ11692]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| Line 38: | Line 38: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=16586 16586] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767] | ** [http://www.genome.jp/dbget-bin/www_bget?R07767 R07767] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.8.1.8}} | {{#set: ec number=EC-2.8.1.8}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=lipoyl synthase}} |
| + | {{#set: gene associated=SJ03663|SJ04393|SJ11692}} | ||
{{#set: in pathway=PWY-6987|PWY0-1275|PWY0-501}} | {{#set: in pathway=PWY-6987|PWY0-1275|PWY0-501}} | ||
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} | ||
Latest revision as of 10:58, 10 January 2019
Contents
Reaction RXN0-949
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- lipoyl synthase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 Octanoylated-domains[c] + 2 Sulfurated-Sulfur-Acceptors[c] + 2 Reduced-2Fe-2S-Ferredoxins[c] + 2 S-ADENOSYLMETHIONINE[c] => 2 MET[c] + 2 Unsulfurated-Sulfur-Acceptors[c] + 1 Lipoyl-Protein-N6-lipoyllysine[c] + 2 CH33ADO[c] + 2 Oxidized-2Fe-2S-Ferredoxins[c]
- With common name(s):
- 1 a [lipoyl-carrier protein] N6-octanoyl-L-lysine[c] + 2 a sulfurated [sulfur carrier][c] + 2 a reduced [2Fe-2S] ferredoxin[c] + 2 S-adenosyl-L-methionine[c] => 2 L-methionine[c] + 2 an unsulfurated [sulfur carrier][c] + 1 a [lipoyl-carrier protein]-N6-lipoyl-L-lysine[c] + 2 5'-deoxyadenosine[c] + 2 an oxidized [2Fe-2S] ferredoxin[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ03663
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ04393
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ11692
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6987, lipoate biosynthesis and incorporation III (Bacillus): PWY-6987
- 2 reactions found over 3 reactions in the full pathway
- PWY0-1275, lipoate biosynthesis and incorporation II: PWY0-1275
- 2 reactions found over 2 reactions in the full pathway
- PWY0-501, lipoate biosynthesis and incorporation I: PWY0-501
- 2 reactions found over 2 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
