Difference between revisions of "PWY-6728"
From metabolic_network
(Created page with "Category:Pathway == Pathway [http://metacyc.org/META/NEW-IMAGE?object=PWY-6728 PWY-6728] == * taxonomic range: ** [http://metacyc.org/META/NEW-IMAGE?object=TAX-183963 TAX-...") |
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| Line 8: | Line 8: | ||
== Reaction(s) found == | == Reaction(s) found == | ||
| − | '''11''' reactions found over ''' | + | '''11''' reactions found over '''19''' reactions in the full pathway |
* [[ACONITATEDEHYDR-RXN]] | * [[ACONITATEDEHYDR-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| − | |||
*** [[SJ18471]] | *** [[SJ18471]] | ||
| + | *** [[SJ22396]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[ACONITATEHYDR-RXN]] | * [[ACONITATEHYDR-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 21: | Line 21: | ||
*** [[SJ22396]] | *** [[SJ22396]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[CITSYN-RXN]] | * [[CITSYN-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
| Line 30: | Line 30: | ||
* [[FUMHYDR-RXN]] | * [[FUMHYDR-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| + | *** [[SJ05770]] | ||
*** [[SJ06896]] | *** [[SJ06896]] | ||
| − | |||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
* [[GLUTAMATE-DEHYDROGENASE-RXN]] | * [[GLUTAMATE-DEHYDROGENASE-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| + | *** [[SJ00250]] | ||
*** [[SJ20174]] | *** [[SJ20174]] | ||
| − | |||
*** [[SJ10621]] | *** [[SJ10621]] | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
| + | *** [[orthology-ectocarpus_siliculosus]] | ||
* [[ISOCITDEH-RXN]] | * [[ISOCITDEH-RXN]] | ||
** 1 associated gene(s): | ** 1 associated gene(s): | ||
*** [[SJ08749]] | *** [[SJ08749]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[MALATE-DEH-RXN]] | * [[MALATE-DEH-RXN]] | ||
** 3 associated gene(s): | ** 3 associated gene(s): | ||
| + | *** [[SJ15746]] | ||
| + | *** [[SJ05075]] | ||
*** [[SJ15523]] | *** [[SJ15523]] | ||
| − | |||
| − | |||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| − | *** [[ | + | *** [[annotation-saccharina_japonica_genome]] |
*** [[orthology-nannochloropsis_salina]] | *** [[orthology-nannochloropsis_salina]] | ||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
| − | |||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
* [[PROPIONYL-COA-CARBOXY-RXN]] | * [[PROPIONYL-COA-CARBOXY-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 76: | Line 68: | ||
*** [[SJ08104]] | *** [[SJ08104]] | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| + | * [[RXN-14937]] | ||
| + | ** 1 associated gene(s): | ||
| + | *** [[SJ03889]] | ||
| + | ** 1 reconstruction source(s) associated: | ||
*** [[annotation-saccharina_japonica_genome]] | *** [[annotation-saccharina_japonica_genome]] | ||
* [[RXN-14971]] | * [[RXN-14971]] | ||
** 6 associated gene(s): | ** 6 associated gene(s): | ||
| + | *** [[SJ01012]] | ||
*** [[SJ02118]] | *** [[SJ02118]] | ||
| − | *** [[ | + | *** [[SJ18770]] |
*** [[SJ19480]] | *** [[SJ19480]] | ||
*** [[SJ02694]] | *** [[SJ02694]] | ||
| − | *** [[ | + | *** [[SJ17484]] |
| − | + | ||
** 2 reconstruction source(s) associated: | ** 2 reconstruction source(s) associated: | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
* [[SUCCCOASYN-RXN]] | * [[SUCCCOASYN-RXN]] | ||
** 2 associated gene(s): | ** 2 associated gene(s): | ||
| Line 95: | Line 92: | ||
** 4 reconstruction source(s) associated: | ** 4 reconstruction source(s) associated: | ||
*** [[orthology-arabidopsis_thaliana]] | *** [[orthology-arabidopsis_thaliana]] | ||
| + | *** [[annotation-saccharina_japonica_genome]] | ||
| + | *** [[orthology-nannochloropsis_salina]] | ||
*** [[orthology-ectocarpus_siliculosus]] | *** [[orthology-ectocarpus_siliculosus]] | ||
| − | |||
| − | |||
== Reaction(s) not found == | == Reaction(s) not found == | ||
| + | * [http://metacyc.org/META/NEW-IMAGE?object=MALYL-COA-LYASE-RXN MALYL-COA-LYASE-RXN] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-AMMONIA-LYASE-RXN METHYLASPARTATE-AMMONIA-LYASE-RXN] | * [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-AMMONIA-LYASE-RXN METHYLASPARTATE-AMMONIA-LYASE-RXN] | ||
* [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-MUTASE-RXN METHYLASPARTATE-MUTASE-RXN] | * [http://metacyc.org/META/NEW-IMAGE?object=METHYLASPARTATE-MUTASE-RXN METHYLASPARTATE-MUTASE-RXN] | ||
| Line 110: | Line 108: | ||
{{#set: common name=methylaspartate cycle}} | {{#set: common name=methylaspartate cycle}} | ||
{{#set: reaction found=11}} | {{#set: reaction found=11}} | ||
| − | {{#set: total reaction= | + | {{#set: total reaction=19}} |
| − | {{#set: completion rate= | + | {{#set: completion rate=57.99999999999999}} |
Latest revision as of 11:35, 10 January 2019
Pathway PWY-6728
- taxonomic range:
- common name:
- methylaspartate cycle
- Synonym(s):
Reaction(s) found
11 reactions found over 19 reactions in the full pathway
- ACONITATEDEHYDR-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- ACONITATEHYDR-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- CITSYN-RXN
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- FUMHYDR-RXN
- 2 associated gene(s):
- 4 reconstruction source(s) associated:
- GLUTAMATE-DEHYDROGENASE-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- ISOCITDEH-RXN
- 1 associated gene(s):
- 2 reconstruction source(s) associated:
- MALATE-DEH-RXN
- 3 associated gene(s):
- 4 reconstruction source(s) associated:
- PROPIONYL-COA-CARBOXY-RXN
- 2 associated gene(s):
- 2 reconstruction source(s) associated:
- RXN-14937
- 1 associated gene(s):
- 1 reconstruction source(s) associated:
- RXN-14971
- 6 associated gene(s):
- 2 reconstruction source(s) associated:
- SUCCCOASYN-RXN
- 2 associated gene(s):
- 4 reconstruction source(s) associated:
Reaction(s) not found
- MALYL-COA-LYASE-RXN
- METHYLASPARTATE-AMMONIA-LYASE-RXN
- METHYLASPARTATE-MUTASE-RXN
- METHYLMALONYL-COA-EPIM-RXN
- METHYLMALONYL-COA-MUT-RXN
- RXN-12168
- RXN-8960
- RXN-8961
