Difference between revisions of "RXN-17523"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-17523 RXN-17523] == * direction: ** LEFT-TO-RIGHT * common name: ** heme oxygenase * ec number:...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
− | |||
− | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.14.15.20 EC-1.14.15.20] | ** [http://enzyme.expasy.org/EC/1.14.15.20 EC-1.14.15.20] | ||
+ | * common name: | ||
+ | ** heme oxygenase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
− | ** | + | ** 1 [[PROTOHEME]][c] '''+''' 3 [[OXYGEN-MOLECULE]][c] '''+''' 6 [[Reduced-ferredoxins]][c] '''+''' 8 [[PROTON]][c] '''=>''' 1 [[BILIVERDINE]][c] '''+''' 1 [[FE+2]][c] '''+''' 1 [[CARBON-MONOXIDE]][c] '''+''' 6 [[Oxidized-ferredoxins]][c] '''+''' 3 [[WATER]][c] |
* With common name(s): | * With common name(s): | ||
− | ** | + | ** 1 ferroheme b[c] '''+''' 3 oxygen[c] '''+''' 6 a reduced ferredoxin [iron-sulfur] cluster[c] '''+''' 8 H+[c] '''=>''' 1 biliverdin-IX-α[c] '''+''' 1 Fe2+[c] '''+''' 1 carbon monoxide[c] '''+''' 6 an oxidized ferredoxin [iron-sulfur] cluster[c] '''+''' 3 H2O[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
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*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
== Pathways == | == Pathways == | ||
+ | * [[PWY-7845]], heme degradation II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7845 PWY-7845] | ||
+ | ** '''1''' reactions found over '''1''' reactions in the full pathway | ||
+ | * [[PWY-7579]], phycourobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7579 PWY-7579] | ||
+ | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7578]], phycoviolobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7578 PWY-7578] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
* [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170] | * [[PWY-7170]], phytochromobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7170 PWY-7170] | ||
** '''2''' reactions found over '''3''' reactions in the full pathway | ** '''2''' reactions found over '''3''' reactions in the full pathway | ||
* [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915] | * [[PWY-5915]], phycoerythrobilin biosynthesis I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5915 PWY-5915] | ||
− | ** ''' | + | ** '''3''' reactions found over '''4''' reactions in the full pathway |
* [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917] | * [[PWY-5917]], phycocyanobilin biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5917 PWY-5917] | ||
** '''1''' reactions found over '''3''' reactions in the full pathway | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
* [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580] | * [[PWY-7580]], phycoerythrobilin biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-7580 PWY-7580] | ||
− | ** ''' | + | ** '''1''' reactions found over '''3''' reactions in the full pathway |
− | + | ||
− | + | ||
− | + | ||
− | + | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
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*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
+ | * RHEA: | ||
+ | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=50233 50233] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
− | |||
{{#set: ec number=EC-1.14.15.20}} | {{#set: ec number=EC-1.14.15.20}} | ||
+ | {{#set: common name=heme oxygenase}} | ||
{{#set: gene associated=SJ20370}} | {{#set: gene associated=SJ20370}} | ||
− | {{#set: in pathway=PWY- | + | {{#set: in pathway=PWY-7845|PWY-7579|PWY-7578|PWY-7170|PWY-5915|PWY-5917|PWY-7580}} |
{{#set: reconstruction category=annotation}} | {{#set: reconstruction category=annotation}} | ||
{{#set: reconstruction source=annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pathwaytools}} | {{#set: reconstruction tool=pathwaytools}} |
Latest revision as of 15:56, 10 January 2019
Contents
Reaction RXN-17523
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- heme oxygenase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PROTOHEME[c] + 3 OXYGEN-MOLECULE[c] + 6 Reduced-ferredoxins[c] + 8 PROTON[c] => 1 BILIVERDINE[c] + 1 FE+2[c] + 1 CARBON-MONOXIDE[c] + 6 Oxidized-ferredoxins[c] + 3 WATER[c]
- With common name(s):
- 1 ferroheme b[c] + 3 oxygen[c] + 6 a reduced ferredoxin [iron-sulfur] cluster[c] + 8 H+[c] => 1 biliverdin-IX-α[c] + 1 Fe2+[c] + 1 carbon monoxide[c] + 6 an oxidized ferredoxin [iron-sulfur] cluster[c] + 3 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ20370
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-7845, heme degradation II: PWY-7845
- 1 reactions found over 1 reactions in the full pathway
- PWY-7579, phycourobilin biosynthesis: PWY-7579
- 3 reactions found over 5 reactions in the full pathway
- PWY-7578, phycoviolobilin biosynthesis: PWY-7578
- 1 reactions found over 4 reactions in the full pathway
- PWY-7170, phytochromobilin biosynthesis: PWY-7170
- 2 reactions found over 3 reactions in the full pathway
- PWY-5915, phycoerythrobilin biosynthesis I: PWY-5915
- 3 reactions found over 4 reactions in the full pathway
- PWY-5917, phycocyanobilin biosynthesis: PWY-5917
- 1 reactions found over 3 reactions in the full pathway
- PWY-7580, phycoerythrobilin biosynthesis II: PWY-7580
- 1 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA: