Difference between revisions of "RXN-5285"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-5285 RXN-5285] == * direction: ** LEFT-TO-RIGHT * common name: ** 3,8-divinyl-protochlorophylli...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.3.1.33 EC-1.3.1.33] | ** [http://enzyme.expasy.org/EC/1.3.1.33 EC-1.3.1.33] | ||
| + | * common name: | ||
| + | ** 3,8-divinyl-protochlorophyllide oxidoreductase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[DIVINYL-PROTOCHLOROPHYLLIDE-A]][c] '''+''' 1 [[NADPH]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[Light]][c] '''=>''' 1 [[NADP]][c] '''+''' 1 [[DIVINYLCHLOROPHYLLIDE-A]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 3,8-divinyl protochlorophyllide a[c] '''+''' 1 NADPH[c] '''+''' 1 H+[c] '''+''' 1 hν[c] '''=>''' 1 NADP+[c] '''+''' 1 3,8-divinyl chlorophyllide a[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ12355]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | + | * Gene: [[SJ09091]] | |
| − | * Gene: [[ | + | |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] | * [[CHLOROPHYLL-SYN]], 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): [http://metacyc.org/META/NEW-IMAGE?object=CHLOROPHYLL-SYN CHLOROPHYLL-SYN] | ||
| Line 38: | Line 38: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R06286 R06286] | ** [http://www.genome.jp/dbget-bin/www_bget?R06286 R06286] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.3.1.33}} | {{#set: ec number=EC-1.3.1.33}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=3,8-divinyl-protochlorophyllide oxidoreductase}} |
| + | {{#set: gene associated=SJ12355|SJ09091}} | ||
{{#set: in pathway=CHLOROPHYLL-SYN}} | {{#set: in pathway=CHLOROPHYLL-SYN}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 10:59, 10 January 2019
Contents
Reaction RXN-5285
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- 3,8-divinyl-protochlorophyllide oxidoreductase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 DIVINYL-PROTOCHLOROPHYLLIDE-A[c] + 1 NADPH[c] + 1 PROTON[c] + 1 Light[c] => 1 NADP[c] + 1 DIVINYLCHLOROPHYLLIDE-A[c]
- With common name(s):
- 1 3,8-divinyl protochlorophyllide a[c] + 1 NADPH[c] + 1 H+[c] + 1 hν[c] => 1 NADP+[c] + 1 3,8-divinyl chlorophyllide a[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ12355
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: annotation-saccharina_japonica_genome
- Gene: SJ09091
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- CHLOROPHYLL-SYN, 3,8-divinyl-chlorophyllide a biosynthesis I (aerobic, light-dependent): CHLOROPHYLL-SYN
- 6 reactions found over 9 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- LIGAND-RXN:
