Difference between revisions of "RXN-2541"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2541 RXN-2541] == * direction: ** LEFT-TO-RIGHT * common name: ** homogentisate phytyltransfera...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/2.5.1.115 EC-2.5.1.115] | ** [http://enzyme.expasy.org/EC/2.5.1.115 EC-2.5.1.115] | ||
| + | * common name: | ||
| + | ** homogentisate phytyltransferase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[PHYTYL-PYROPHOSPHATE]][c] '''+''' 1 [[HOMOGENTISATE]][c] '''+''' 1 [[PROTON]][c] '''=>''' 1 [[MPBQ]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[PPI]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 phytyl diphosphate[c] '''+''' 1 homogentisate[c] '''+''' 1 H+[c] '''=>''' 1 2-methyl-6-phytyl-1,4-benzoquinol[c] '''+''' 1 CO2[c] '''+''' 1 diphosphate[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 20: | Line 20: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
* [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] | * [[PWY-1422]], vitamin E biosynthesis (tocopherols): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1422 PWY-1422] | ||
| − | ** ''' | + | ** '''5''' reactions found over '''7''' reactions in the full pathway |
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 35: | Line 35: | ||
*** Tool: [[pathwaytools]] | *** Tool: [[pathwaytools]] | ||
== External links == | == External links == | ||
| + | * RHEA: | ||
| + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=37976 37976] | ||
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R07500 R07500] | ** [http://www.genome.jp/dbget-bin/www_bget?R07500 R07500] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-2.5.1.115}} | {{#set: ec number=EC-2.5.1.115}} | ||
| + | {{#set: common name=homogentisate phytyltransferase}} | ||
{{#set: gene associated=SJ01234}} | {{#set: gene associated=SJ01234}} | ||
{{#set: in pathway=PWY-1422}} | {{#set: in pathway=PWY-1422}} | ||
Latest revision as of 14:59, 10 January 2019
Contents
Reaction RXN-2541
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- homogentisate phytyltransferase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 PHYTYL-PYROPHOSPHATE[c] + 1 HOMOGENTISATE[c] + 1 PROTON[c] => 1 MPBQ[c] + 1 CARBON-DIOXIDE[c] + 1 PPI[c]
- With common name(s):
- 1 phytyl diphosphate[c] + 1 homogentisate[c] + 1 H+[c] => 1 2-methyl-6-phytyl-1,4-benzoquinol[c] + 1 CO2[c] + 1 diphosphate[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ01234
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-1422, vitamin E biosynthesis (tocopherols): PWY-1422
- 5 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
