Difference between revisions of "N-CARBAMOYLPUTRESCINE-AMIDASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=N-CARBAMOYLPUTRESCINE-AMIDASE-RXN N-CARBAMOYLPUTRESCINE-AMIDASE-RXN] == * direction: ** LEFT-TO-RIG...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.5.1.53 EC-3.5.1.53] | ** [http://enzyme.expasy.org/EC/3.5.1.53 EC-3.5.1.53] | ||
| + | * common name: | ||
| + | ** N-carbamoylputrescine amidohydrolase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** | + | ** 2 [[PROTON]][c] '''+''' 1 [[CPD-597]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[PUTRESCINE]][c] '''+''' 1 [[CARBON-DIOXIDE]][c] '''+''' 1 [[AMMONIUM]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** | + | ** 2 H+[c] '''+''' 1 N-carbamoylputrescine[c] '''+''' 1 H2O[c] '''=>''' 1 putrescine[c] '''+''' 1 CO2[c] '''+''' 1 ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
| Line 22: | Line 22: | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-III-PWY ARGDEG-III-PWY] | * [[ARGDEG-III-PWY]], L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): [http://metacyc.org/META/NEW-IMAGE?object=ARGDEG-III-PWY ARGDEG-III-PWY] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-43]], putrescine biosynthesis II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-43 PWY-43] | ||
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
| Line 35: | Line 35: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=22285 22285] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R01152 R01152] | ** [http://www.genome.jp/dbget-bin/www_bget?R01152 R01152] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.5.1.53}} | {{#set: ec number=EC-3.5.1.53}} | ||
| + | {{#set: common name=N-carbamoylputrescine amidohydrolase}} | ||
{{#set: gene associated=SJ06121}} | {{#set: gene associated=SJ06121}} | ||
| − | {{#set: in pathway= | + | {{#set: in pathway=ARGDEG-III-PWY|PWY-43}} |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:02, 10 January 2019
Contents
Reaction N-CARBAMOYLPUTRESCINE-AMIDASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- N-carbamoylputrescine amidohydrolase
- Synonym(s):
Reaction Formula
- With identifiers:
- 2 PROTON[c] + 1 CPD-597[c] + 1 WATER[c] => 1 PUTRESCINE[c] + 1 CARBON-DIOXIDE[c] + 1 AMMONIUM[c]
- With common name(s):
- 2 H+[c] + 1 N-carbamoylputrescine[c] + 1 H2O[c] => 1 putrescine[c] + 1 CO2[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ06121
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- ARGDEG-III-PWY, L-arginine degradation IV (arginine decarboxylase/agmatine deiminase pathway): ARGDEG-III-PWY
- 3 reactions found over 3 reactions in the full pathway
- PWY-43, putrescine biosynthesis II: PWY-43
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
