Difference between revisions of "RXN-12581"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12581 RXN-12581] == * direction: ** LEFT-TO-RIGHT * common name: ** all-trans-retinol dehydroge...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
 +
* ec number:
 +
** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
 
* common name:
 
* common name:
 
** all-trans-retinol dehydrogenase
 
** all-trans-retinol dehydrogenase
 
** retinol dehydrogenase
 
** retinol dehydrogenase
−
* ec number:
 
−
** [http://enzyme.expasy.org/EC/1.1.1.105 EC-1.1.1.105]
 
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[CRPB-all-trans-Retinol]][c] '''=>''' 1 [[CRPB-all-trans-Retinal]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
+
** 1 [[CRPB-all-trans-Retinol]][c] '''+''' 1 [[NAD]][c] '''=>''' 1 [[CRPB-all-trans-Retinal]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 an all-trans retinol-[cellular-retinol-binding-protein][c] '''=>''' 1 an all-trans retinal-[cellular-retinol-binding-protein][c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
+
** 1 an all-trans retinol-[cellular-retinol-binding-protein][c] '''+''' 1 NAD+[c] '''=>''' 1 an all-trans retinal-[cellular-retinol-binding-protein][c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ19151]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
−
* Gene: [[SJ02723]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
* Gene: [[SJ21322]]
 
* Gene: [[SJ21322]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 33: Line 27:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ05275]]
+
* Gene: [[SJ10028]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ05277]]
+
* Gene: [[SJ12574]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
−
*** Assignment: EC-NUMBER
+
*** Assignment: GO-TERM
 
* Gene: [[SJ05274]]
 
* Gene: [[SJ05274]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ05276]]
+
* Gene: [[SJ05277]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ12574]]
+
* Gene: [[SJ02723]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: GO-TERM
 
*** Assignment: GO-TERM
−
* Gene: [[SJ10028]]
+
* Gene: [[SJ19151]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 +
* Gene: [[SJ05275]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ05276]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
Line 59: Line 59:
 
*** Tool: [[pathwaytools]]
 
*** Tool: [[pathwaytools]]
 
== External links  ==
 
== External links  ==
 +
* RHEA:
 +
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=48489 48489]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
 +
{{#set: ec number=EC-1.1.1.105}}
 
{{#set: common name=all-trans-retinol dehydrogenase}}
 
{{#set: common name=all-trans-retinol dehydrogenase}}
 
{{#set: common name=retinol dehydrogenase}}
 
{{#set: common name=retinol dehydrogenase}}
−
{{#set: ec number=EC-1.1.1.105}}
+
{{#set: gene associated=SJ21322|SJ20291|SJ21312|SJ10028|SJ12574|SJ05274|SJ05277|SJ02723|SJ19151|SJ05275|SJ05276}}
−
{{#set: gene associated=SJ19151|SJ02723|SJ21322|SJ20291|SJ21312|SJ05275|SJ05277|SJ05274|SJ05276|SJ12574|SJ10028}}
+
 
{{#set: in pathway=PWY-6872}}
 
{{#set: in pathway=PWY-6872}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction category=annotation}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction source=annotation-saccharina_japonica_genome}}
 
{{#set: reconstruction tool=pathwaytools}}
 
{{#set: reconstruction tool=pathwaytools}}

Latest revision as of 15:09, 10 January 2019

Reaction RXN-12581

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • all-trans-retinol dehydrogenase
    • retinol dehydrogenase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 an all-trans retinol-[cellular-retinol-binding-protein][c] + 1 NAD+[c] => 1 an all-trans retinal-[cellular-retinol-binding-protein][c] + 1 NADH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • PWY-6872, retinoate biosynthesis I: PWY-6872
    • 1 reactions found over 4 reactions in the full pathway

Reconstruction information

External links





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