Difference between revisions of "AMP-DEAMINASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=AMP-DEAMINASE-RXN AMP-DEAMINASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** AMP deamina...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/3.5.4.17 EC-3.5.4.17] | ** [http://enzyme.expasy.org/EC/3.5.4.17 EC-3.5.4.17] | ||
** [http://enzyme.expasy.org/EC/3.5.4.6 EC-3.5.4.6] | ** [http://enzyme.expasy.org/EC/3.5.4.6 EC-3.5.4.6] | ||
| + | * common name: | ||
| + | ** AMP deaminase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[AMP]][c] '''+''' 1 [[PROTON]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[IMP]][c] '''+''' 1 [[AMMONIUM]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 AMP[c] '''+''' 1 H+[c] '''+''' 1 H2O[c] '''=>''' 1 IMP[c] '''+''' 1 ammonium[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| + | * Gene: [[SJ10996]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ15115]] | * Gene: [[SJ15115]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
| − | |||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| Line 36: | Line 36: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=14778 14778] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181] | ** [http://www.genome.jp/dbget-bin/www_bget?R00181 R00181] | ||
| Line 48: | Line 48: | ||
** [http://www.uniprot.org/uniprot/Q01432 Q01432] | ** [http://www.uniprot.org/uniprot/Q01432 Q01432] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-3.5.4.17}} | {{#set: ec number=EC-3.5.4.17}} | ||
{{#set: ec number=EC-3.5.4.6}} | {{#set: ec number=EC-3.5.4.6}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=AMP deaminase}} |
| + | {{#set: gene associated=SJ10996|SJ15115}} | ||
{{#set: in pathway=PWY-6596}} | {{#set: in pathway=PWY-6596}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source= | + | {{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:16, 10 January 2019
Contents
Reaction AMP-DEAMINASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- AMP deaminase
- Synonym(s):
Reaction Formula
- With identifiers:
- With common name(s):
- 1 AMP[c] + 1 H+[c] + 1 H2O[c] => 1 IMP[c] + 1 ammonium[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ10996
- Source: orthology-ectocarpus_siliculosus
- Gene: SJ15115
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
Pathways
- PWY-6596, adenosine nucleotides degradation I: PWY-6596
- 7 reactions found over 8 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
