Difference between revisions of "RXN-7682"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-7682 RXN-7682] == * direction: ** LEFT-TO-RIGHT * common name: ** hypoxanthine hydroxylase * ec...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** hypoxanthine hydroxylase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
 
** [http://enzyme.expasy.org/EC/1.17.1.4 EC-1.17.1.4]
 +
* common name:
 +
** hypoxanthine hydroxylase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''+''' 1 [[HYPOXANTHINE]][c] '''=>''' 1 [[PROTON]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[XANTHINE]][c]
+
** 1 [[HYPOXANTHINE]][c] '''+''' 1 [[NAD]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[XANTHINE]][c] '''+''' 1 [[NADH]][c] '''+''' 1 [[PROTON]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 NAD+[c] '''+''' 1 H2O[c] '''+''' 1 hypoxanthine[c] '''=>''' 1 H+[c] '''+''' 1 NADH[c] '''+''' 1 xanthine[c]
+
** 1 hypoxanthine[c] '''+''' 1 NAD+[c] '''+''' 1 H2O[c] '''=>''' 1 xanthine[c] '''+''' 1 NADH[c] '''+''' 1 H+[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ05660]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: EC-NUMBER
 
−
** Source: [[orthology-ectocarpus_siliculosus]]
 
 
* Gene: [[SJ05673]]
 
* Gene: [[SJ05673]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ05674]]
+
* Gene: [[SJ05668]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
−
** Source: [[orthology-arabidopsis_thaliana]]
+
* Gene: [[SJ13098]]
−
* Gene: [[SJ05668]]
+
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-ectocarpus_siliculosus]]
+
** Source: [[orthology-arabidopsis_thaliana]]
 
* Gene: [[SJ13101]]
 
* Gene: [[SJ13101]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 +
* Gene: [[SJ05674]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: EC-NUMBER
 +
** Source: [[orthology-arabidopsis_thaliana]]
 +
** Source: [[orthology-ectocarpus_siliculosus]]
 
* Gene: [[SJ13100]]
 
* Gene: [[SJ13100]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
Line 42: Line 42:
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
* Gene: [[SJ13098]]
+
* Gene: [[SJ05660]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
−
** Source: [[orthology-arabidopsis_thaliana]]
+
** Source: [[orthology-ectocarpus_siliculosus]]
 
== Pathways  ==
 
== Pathways  ==
 
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
 
* [[P164-PWY]], purine nucleobases degradation I (anaerobic): [http://metacyc.org/META/NEW-IMAGE?object=P164-PWY P164-PWY]
Line 64: Line 64:
 
== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24670 24670]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=24671 24671]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R01768 R01768]
 
** [http://www.genome.jp/dbget-bin/www_bget?R01768 R01768]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=hypoxanthine hydroxylase}}
 
 
{{#set: ec number=EC-1.17.1.4}}
 
{{#set: ec number=EC-1.17.1.4}}
−
{{#set: gene associated=SJ05660|SJ05673|SJ05674|SJ05668|SJ13101|SJ13100|SJ13095|SJ13098}}
+
{{#set: common name=hypoxanthine hydroxylase}}
 +
{{#set: gene associated=SJ05673|SJ05668|SJ13098|SJ13101|SJ05674|SJ13100|SJ13095|SJ05660}}
 
{{#set: in pathway=P164-PWY|PWY-6596|SALVADEHYPOX-PWY}}
 
{{#set: in pathway=P164-PWY|PWY-6596|SALVADEHYPOX-PWY}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 15:22, 10 January 2019

Reaction RXN-7682

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • hypoxanthine hydroxylase
  • Synonym(s):

Reaction Formula

  • With identifiers:
  • With common name(s):
    • 1 hypoxanthine[c] + 1 NAD+[c] + 1 H2O[c] => 1 xanthine[c] + 1 NADH[c] + 1 H+[c]

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • P164-PWY, purine nucleobases degradation I (anaerobic): P164-PWY
    • 6 reactions found over 17 reactions in the full pathway
  • PWY-6596, adenosine nucleotides degradation I: PWY-6596
    • 7 reactions found over 8 reactions in the full pathway
  • SALVADEHYPOX-PWY, adenosine nucleotides degradation II: SALVADEHYPOX-PWY
    • 5 reactions found over 5 reactions in the full pathway

Reconstruction information

External links





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