Difference between revisions of "URATE-OXIDASE-RXN"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=URATE-OXIDASE-RXN URATE-OXIDASE-RXN] == * direction: ** LEFT-TO-RIGHT * common name: ** factor-inde...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| − | |||
| − | |||
* ec number: | * ec number: | ||
** [http://enzyme.expasy.org/EC/1.7.3.3 EC-1.7.3.3] | ** [http://enzyme.expasy.org/EC/1.7.3.3 EC-1.7.3.3] | ||
| + | * common name: | ||
| + | ** factor-independent urate hydroxylase | ||
* Synonym(s): | * Synonym(s): | ||
== Reaction Formula == | == Reaction Formula == | ||
* With identifiers: | * With identifiers: | ||
| − | ** 1 [[ | + | ** 1 [[URATE]][c] '''+''' 1 [[OXYGEN-MOLECULE]][c] '''+''' 1 [[WATER]][c] '''=>''' 1 [[5-HYDROXYISOURATE]][c] '''+''' 1 [[HYDROGEN-PEROXIDE]][c] |
* With common name(s): | * With common name(s): | ||
| − | ** 1 | + | ** 1 urate[c] '''+''' 1 oxygen[c] '''+''' 1 H2O[c] '''=>''' 1 (S)-5-hydroxyisourate[c] '''+''' 1 hydrogen peroxide[c] |
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | |||
| − | |||
* Gene: [[SJ00979]] | * Gene: [[SJ00979]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| + | * Gene: [[SJ19970]] | ||
| + | ** Source: [[orthology-nannochloropsis_salina]] | ||
== Pathways == | == Pathways == | ||
| − | * [[PWY-5691]], urate | + | * [[PWY-5691]], urate conversion to allantoin I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-5691 PWY-5691] |
** '''3''' reactions found over '''3''' reactions in the full pathway | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| − | |||
| − | |||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 41: | Line 41: | ||
== External links == | == External links == | ||
* RHEA: | * RHEA: | ||
| − | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id= | + | ** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=21369 21369] |
* LIGAND-RXN: | * LIGAND-RXN: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R02106 R02106] | ** [http://www.genome.jp/dbget-bin/www_bget?R02106 R02106] | ||
| Line 60: | Line 60: | ||
** [http://www.uniprot.org/uniprot/P53763 P53763] | ** [http://www.uniprot.org/uniprot/P53763 P53763] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| − | |||
{{#set: ec number=EC-1.7.3.3}} | {{#set: ec number=EC-1.7.3.3}} | ||
| − | {{#set: gene associated= | + | {{#set: common name=factor-independent urate hydroxylase}} |
| + | {{#set: gene associated=SJ00979|SJ19970}} | ||
{{#set: in pathway=PWY-5691}} | {{#set: in pathway=PWY-5691}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
| − | {{#set: reconstruction source=orthology-arabidopsis_thaliana| | + | {{#set: reconstruction source=orthology-arabidopsis_thaliana|annotation-saccharina_japonica_genome|orthology-nannochloropsis_salina|orthology-ectocarpus_siliculosus}} |
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 15:28, 10 January 2019
Contents
Reaction URATE-OXIDASE-RXN
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- factor-independent urate hydroxylase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 URATE[c] + 1 OXYGEN-MOLECULE[c] + 1 WATER[c] => 1 5-HYDROXYISOURATE[c] + 1 HYDROGEN-PEROXIDE[c]
- With common name(s):
- 1 urate[c] + 1 oxygen[c] + 1 H2O[c] => 1 (S)-5-hydroxyisourate[c] + 1 hydrogen peroxide[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00979
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-nannochloropsis_salina
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ19970
- Source: orthology-nannochloropsis_salina
Pathways
- PWY-5691, urate conversion to allantoin I: PWY-5691
- 3 reactions found over 3 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
- RHEA:
- LIGAND-RXN:
- UNIPROT:
