Difference between revisions of "RXN-2425"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-2425 RXN-2425] == * direction: ** REVERSIBLE * common name: ** 2,3-dehydroadipyl-CoA hydratase...") |
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| Line 3: | Line 3: | ||
* direction: | * direction: | ||
** REVERSIBLE | ** REVERSIBLE | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17] | ||
* common name: | * common name: | ||
** 2,3-dehydroadipyl-CoA hydratase | ** 2,3-dehydroadipyl-CoA hydratase | ||
** enoyl-CoA hydratase | ** enoyl-CoA hydratase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
| Line 18: | Line 18: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ03913]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ14591]] | * Gene: [[SJ14591]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | * Gene: [[ | + | * Gene: [[SJ07211]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
| − | |||
** Source: [[orthology-arabidopsis_thaliana]] | ** Source: [[orthology-arabidopsis_thaliana]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ03584]] | * Gene: [[SJ03584]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 41: | Line 41: | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
== Pathways == | == Pathways == | ||
| − | |||
| − | |||
* [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321] | * [[PWY0-321]], phenylacetate degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY0-321 PWY0-321] | ||
** '''2''' reactions found over '''9''' reactions in the full pathway | ** '''2''' reactions found over '''9''' reactions in the full pathway | ||
| + | * [[PWY-1361]], benzoyl-CoA degradation I (aerobic): [http://metacyc.org/META/NEW-IMAGE?object=PWY-1361 PWY-1361] | ||
| + | ** '''2''' reactions found over '''7''' reactions in the full pathway | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| Line 60: | Line 60: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942] | ** [http://www.genome.jp/dbget-bin/www_bget?R06942 R06942] | ||
{{#set: direction=REVERSIBLE}} | {{#set: direction=REVERSIBLE}} | ||
| + | {{#set: ec number=EC-4.2.1.17}} | ||
{{#set: common name=2,3-dehydroadipyl-CoA hydratase}} | {{#set: common name=2,3-dehydroadipyl-CoA hydratase}} | ||
{{#set: common name=enoyl-CoA hydratase}} | {{#set: common name=enoyl-CoA hydratase}} | ||
| − | + | {{#set: gene associated=SJ03913|SJ14591|SJ07211|SJ03584|SJ21390|SJ10275}} | |
| − | {{#set: gene associated= | + | {{#set: in pathway=PWY0-321|PWY-1361}} |
| − | {{#set: in pathway=PWY-1361 | + | |
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-arabidopsis_thaliana|orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 16:31, 10 January 2019
Contents
Reaction RXN-2425
- direction:
- REVERSIBLE
- ec number:
- common name:
- 2,3-dehydroadipyl-CoA hydratase
- enoyl-CoA hydratase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 3-HYDROXYADIPYL-COA[c] <=> 1 TRANS-23-DEHYDROADIPYL-COA[c] + 1 WATER[c]
- With common name(s):
- 1 (3S)-hydroxyadipyl-CoA[c] <=> 1 trans-2,3-dehydroadipyl-coA[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ03913
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14591
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07211
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-arabidopsis_thaliana
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03584
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ21390
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10275
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY0-321, phenylacetate degradation I (aerobic): PWY0-321
- 2 reactions found over 9 reactions in the full pathway
- PWY-1361, benzoyl-CoA degradation I (aerobic): PWY-1361
- 2 reactions found over 7 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-arabidopsis_thaliana
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-arabidopsis_thaliana
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
