Difference between revisions of "5-FORMYL-THF-CYCLO-LIGASE-RXN"

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(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=5-FORMYL-THF-CYCLO-LIGASE-RXN 5-FORMYL-THF-CYCLO-LIGASE-RXN] == * direction: ** LEFT-TO-RIGHT * com...")
 
 
Line 3: Line 3:
 
* direction:
 
* direction:
 
** LEFT-TO-RIGHT
 
** LEFT-TO-RIGHT
−
* common name:
 
−
** 5-formyltetrahydrofolate cyclo-ligase
 
 
* ec number:
 
* ec number:
 
** [http://enzyme.expasy.org/EC/6.3.3.2 EC-6.3.3.2]
 
** [http://enzyme.expasy.org/EC/6.3.3.2 EC-6.3.3.2]
 +
* common name:
 +
** 5-formyltetrahydrofolate cyclo-ligase
 
* Synonym(s):
 
* Synonym(s):
  
 
== Reaction Formula ==
 
== Reaction Formula ==
 
* With identifiers:
 
* With identifiers:
−
** 1 [[N5-Formyl-THF-Glu-N]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[Pi]][c] '''+''' 1 [[ADP]][c]
+
** 1 [[N5-Formyl-THF-Glu-N]][c] '''+''' 1 [[ATP]][c] '''=>''' 1 [[5-10-METHENYL-THF-GLU-N]][c] '''+''' 1 [[ADP]][c] '''+''' 1 [[Pi]][c]
 
* With common name(s):
 
* With common name(s):
−
** 1 an (6S)-N5-formyl-tetrahydrofolate[c] '''+''' 1 ATP[c] '''=>''' 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 1 phosphate[c] '''+''' 1 ADP[c]
+
** 1 an (6S)-N5-formyl-tetrahydrofolate[c] '''+''' 1 ATP[c] '''=>''' 1 a 5,10-methenyltetrahydrofolate[c] '''+''' 1 ADP[c] '''+''' 1 phosphate[c]
  
 
== Genes associated with this reaction  ==
 
== Genes associated with this reaction  ==
 
Genes have been associated with this reaction based on different elements listed below.
 
Genes have been associated with this reaction based on different elements listed below.
−
* Gene: [[SJ19600]]
 
−
** Source: [[annotation-saccharina_japonica_genome]]
 
−
*** Assignment: GO-TERM
 
 
* Gene: [[SJ02064]]
 
* Gene: [[SJ02064]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
** Source: [[annotation-saccharina_japonica_genome]]
 
*** Assignment: EC-NUMBER
 
*** Assignment: EC-NUMBER
 
** Source: [[orthology-ectocarpus_siliculosus]]
 
** Source: [[orthology-ectocarpus_siliculosus]]
 +
* Gene: [[SJ19600]]
 +
** Source: [[annotation-saccharina_japonica_genome]]
 +
*** Assignment: GO-TERM
 
== Pathways  ==
 
== Pathways  ==
−
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 
−
** '''12''' reactions found over '''12''' reactions in the full pathway
 
 
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
 
* [[1CMET2-PWY]], N10-formyl-tetrahydrofolate biosynthesis: [http://metacyc.org/META/NEW-IMAGE?object=1CMET2-PWY 1CMET2-PWY]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
 
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
 
* [[PWY-3841]], folate transformations II: [http://metacyc.org/META/NEW-IMAGE?object=PWY-3841 PWY-3841]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
** '''9''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-2201]], folate transformations I: [http://metacyc.org/META/NEW-IMAGE?object=PWY-2201 PWY-2201]
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 
== Reconstruction information  ==
 
== Reconstruction information  ==
 
* Category: [[orthology]]
 
* Category: [[orthology]]
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== External links  ==
 
== External links  ==
 
* RHEA:
 
* RHEA:
−
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10488 10488]
+
** [http://www.ebi.ac.uk/rhea/reaction.xhtml?id=10489 10489]
 
* LIGAND-RXN:
 
* LIGAND-RXN:
 
** [http://www.genome.jp/dbget-bin/www_bget?R02301 R02301]
 
** [http://www.genome.jp/dbget-bin/www_bget?R02301 R02301]
Line 47: Line 47:
 
** [http://www.uniprot.org/uniprot/P49914 P49914]
 
** [http://www.uniprot.org/uniprot/P49914 P49914]
 
{{#set: direction=LEFT-TO-RIGHT}}
 
{{#set: direction=LEFT-TO-RIGHT}}
−
{{#set: common name=5-formyltetrahydrofolate cyclo-ligase}}
 
 
{{#set: ec number=EC-6.3.3.2}}
 
{{#set: ec number=EC-6.3.3.2}}
−
{{#set: gene associated=SJ19600|SJ02064}}
+
{{#set: common name=5-formyltetrahydrofolate cyclo-ligase}}
−
{{#set: in pathway=PWY-2201|1CMET2-PWY|PWY-3841}}
+
{{#set: gene associated=SJ02064|SJ19600}}
 +
{{#set: in pathway=1CMET2-PWY|PWY-3841|PWY-2201}}
 
{{#set: reconstruction category=orthology|annotation}}
 
{{#set: reconstruction category=orthology|annotation}}
−
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|annotation-saccharina_japonica_genome}}
+
{{#set: reconstruction source=annotation-saccharina_japonica_genome|orthology-ectocarpus_siliculosus}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}
 
{{#set: reconstruction tool=pantograph|pathwaytools}}

Latest revision as of 12:04, 10 January 2019

Reaction 5-FORMYL-THF-CYCLO-LIGASE-RXN

  • direction:
    • LEFT-TO-RIGHT
  • ec number:
  • common name:
    • 5-formyltetrahydrofolate cyclo-ligase
  • Synonym(s):

Reaction Formula

Genes associated with this reaction

Genes have been associated with this reaction based on different elements listed below.

Pathways

  • 1CMET2-PWY, N10-formyl-tetrahydrofolate biosynthesis: 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-3841, folate transformations II: PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • PWY-2201, folate transformations I: PWY-2201
    • 9 reactions found over 12 reactions in the full pathway

Reconstruction information

External links





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