Difference between revisions of "RXN-12567"
From metabolic_network
(Created page with "Category:Reaction == Reaction [http://metacyc.org/META/NEW-IMAGE?object=RXN-12567 RXN-12567] == * direction: ** LEFT-TO-RIGHT * common name: ** enoyl-CoA hydratase ** 3-hy...") |
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* direction: | * direction: | ||
** LEFT-TO-RIGHT | ** LEFT-TO-RIGHT | ||
| + | * ec number: | ||
| + | ** [http://enzyme.expasy.org/EC/4.2.1.17 EC-4.2.1.17] | ||
* common name: | * common name: | ||
** enoyl-CoA hydratase | ** enoyl-CoA hydratase | ||
** 3-hydroxyhexanoyl-CoA dehydratase | ** 3-hydroxyhexanoyl-CoA dehydratase | ||
| − | |||
| − | |||
* Synonym(s): | * Synonym(s): | ||
| Line 18: | Line 18: | ||
== Genes associated with this reaction == | == Genes associated with this reaction == | ||
Genes have been associated with this reaction based on different elements listed below. | Genes have been associated with this reaction based on different elements listed below. | ||
| − | * Gene: [[ | + | * Gene: [[SJ00040]] |
| − | + | ||
| − | + | ||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
* Gene: [[SJ03913]] | * Gene: [[SJ03913]] | ||
| Line 26: | Line 24: | ||
*** Assignment: EC-NUMBER | *** Assignment: EC-NUMBER | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| − | * Gene: [[ | + | * Gene: [[SJ03584]] |
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| − | *** Assignment: | + | *** Assignment: GO-TERM |
| − | ** Source: [[orthology- | + | ** Source: [[orthology-nannochloropsis_salina]] |
* Gene: [[SJ21390]] | * Gene: [[SJ21390]] | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
| Line 37: | Line 35: | ||
** Source: [[annotation-saccharina_japonica_genome]] | ** Source: [[annotation-saccharina_japonica_genome]] | ||
*** Assignment: GO-TERM | *** Assignment: GO-TERM | ||
| − | * Gene: [[ | + | * Gene: [[SJ07211]] |
| − | ** Source: [[orthology- | + | ** Source: [[annotation-saccharina_japonica_genome]] |
| + | *** Assignment: EC-NUMBER | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
* Gene: [[SJ10275]] | * Gene: [[SJ10275]] | ||
** Source: [[orthology-ectocarpus_siliculosus]] | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
| Line 46: | Line 46: | ||
== Reconstruction information == | == Reconstruction information == | ||
* Category: [[orthology]] | * Category: [[orthology]] | ||
| − | |||
| − | |||
** Source: [[orthology-nannochloropsis_salina]] | ** Source: [[orthology-nannochloropsis_salina]] | ||
| + | *** Tool: [[pantograph]] | ||
| + | ** Source: [[orthology-ectocarpus_siliculosus]] | ||
*** Tool: [[pantograph]] | *** Tool: [[pantograph]] | ||
* Category: [[annotation]] | * Category: [[annotation]] | ||
| Line 59: | Line 59: | ||
** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749] | ** [http://www.genome.jp/dbget-bin/www_bget?R04749 R04749] | ||
{{#set: direction=LEFT-TO-RIGHT}} | {{#set: direction=LEFT-TO-RIGHT}} | ||
| + | {{#set: ec number=EC-4.2.1.17}} | ||
{{#set: common name=enoyl-CoA hydratase}} | {{#set: common name=enoyl-CoA hydratase}} | ||
{{#set: common name=3-hydroxyhexanoyl-CoA dehydratase}} | {{#set: common name=3-hydroxyhexanoyl-CoA dehydratase}} | ||
| − | + | {{#set: gene associated=SJ00040|SJ03913|SJ03584|SJ21390|SJ14591|SJ07211|SJ10275}} | |
| − | {{#set: gene associated= | + | |
{{#set: in pathway=PWY-6863}} | {{#set: in pathway=PWY-6863}} | ||
{{#set: reconstruction category=orthology|annotation}} | {{#set: reconstruction category=orthology|annotation}} | ||
{{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | {{#set: reconstruction source=orthology-ectocarpus_siliculosus|orthology-nannochloropsis_salina|annotation-saccharina_japonica_genome}} | ||
{{#set: reconstruction tool=pantograph|pathwaytools}} | {{#set: reconstruction tool=pantograph|pathwaytools}} | ||
Latest revision as of 11:06, 10 January 2019
Contents
Reaction RXN-12567
- direction:
- LEFT-TO-RIGHT
- ec number:
- common name:
- enoyl-CoA hydratase
- 3-hydroxyhexanoyl-CoA dehydratase
- Synonym(s):
Reaction Formula
- With identifiers:
- 1 OH-HEXANOYL-COA[c] => 1 CPD0-2121[c] + 1 WATER[c]
- With common name(s):
- 1 (S)-3-hydroxyhexanoyl-CoA[c] => 1 trans-hex-2-enoyl-CoA[c] + 1 H2O[c]
Genes associated with this reaction
Genes have been associated with this reaction based on different elements listed below.
- Gene: SJ00040
- Source: orthology-nannochloropsis_salina
- Gene: SJ03913
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ03584
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: orthology-nannochloropsis_salina
- Source: annotation-saccharina_japonica_genome
- Gene: SJ21390
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ14591
- Source: annotation-saccharina_japonica_genome
- Assignment: GO-TERM
- Source: annotation-saccharina_japonica_genome
- Gene: SJ07211
- Source: annotation-saccharina_japonica_genome
- Assignment: EC-NUMBER
- Source: orthology-ectocarpus_siliculosus
- Source: annotation-saccharina_japonica_genome
- Gene: SJ10275
- Source: orthology-ectocarpus_siliculosus
Pathways
- PWY-6863, pyruvate fermentation to hexanol (engineered): PWY-6863
- 9 reactions found over 11 reactions in the full pathway
Reconstruction information
- Category: orthology
- Source: orthology-nannochloropsis_salina
- Tool: pantograph
- Source: orthology-ectocarpus_siliculosus
- Tool: pantograph
- Source: orthology-nannochloropsis_salina
- Category: annotation
- Source: annotation-saccharina_japonica_genome
- Tool: pathwaytools
- Source: annotation-saccharina_japonica_genome
External links
